Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., fumarate hydratase class II from Phaeobacter inhibens DSM 17395

 Score =  361 bits (927), Expect = e-104
 Identities = 194/455 (42%), Positives = 280/455 (61%), Gaps = 6/455 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           R E DS G ++VPA+  + AQTQR++ NF +     P A + AL  IKQA AM N   G 
Sbjct: 5   RTETDSFGPLEVPANKYWGAQTQRSIMNFPIGWEKQPVAIVRALGVIKQACAMANKASGK 64

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELGYAVS- 124
           L+  I  A+  A+  VI+G++   FP+ V+QTGSGT SNMN+NEVIA  A   LG  +  
Sbjct: 65  LDARIGDAVIQAAGEVIEGKFDDNFPLVVWQTGSGTQSNMNSNEVIANRAIEILGGVIGS 124

Query: 125 -----PNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
                PNDH NMGQSSND  PTA+ ++ A+ +   L+P L  L++ L  K     D++K 
Sbjct: 125 KDPVHPNDHCNMGQSSNDTFPTAMHIATAMMVRDVLVPGLTKLAEGLEAKAEAFKDIIKI 184

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTH  DA P+T  QE GG+  QI      +  A+  I  LAQGGTAVGTG+N    +  
Sbjct: 185 GRTHTQDATPLTLGQEFGGYAHQIRQGLARVEAAMPGIYELAQGGTAVGTGLNTQKGWGE 244

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A N+++++ + F  + N F  L++ D +V LSG L T A +  KIAND+R++ SGP +
Sbjct: 245 TVAANMAEITGLPFVTAPNKFEALAAHDAMVFLSGALATIAGSCYKIANDIRFLGSGPRS 304

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           GLGE+ L   +PGSSIMPGKVNP   EA+T VAA V+GND  I  AG  G+F+LNV  P+
Sbjct: 305 GLGELILPENEPGSSIMPGKVNPTQAEALTQVAAHVMGNDAAIKFAGSQGHFELNVYNPM 364

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           +++NLL+SI+LL +A  +  ++ +   +     ++K + ++ +LVTAL P IGY  A  +
Sbjct: 365 MSYNLLQSIQLLGDAADSFTERMLNGIEANEPRIDKLMKESLMLVTALAPTIGYDNATKV 424

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKL 454
           AK A++ G  + + A     +D A+ +A++ P+++
Sbjct: 425 AKTAHKNGTTLKEEAIALGFVDEASFDAVVRPEQM 459