Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., fumarate hydratase, class II (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  357 bits (915), Expect = e-103
 Identities = 198/460 (43%), Positives = 277/460 (60%), Gaps = 6/460 (1%)

Query: 1   MTREYRIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTN 60
           MT   RIE DSMG V+VPAD  + AQTQRA+++F +    MP   + AL  IK+AAA TN
Sbjct: 2   MTPAVRIEHDSMGAVEVPADRYWGAQTQRALEHFRIGTERMPQEMVQALGLIKRAAAETN 61

Query: 61  AQLGHLEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELG 120
           A L  L    A A+A A+  V  G     FP+ V+QTGSGT +NMN NEV+A  A   LG
Sbjct: 62  AALELLPRQTADAVARAATEVASGALPNHFPLCVWQTGSGTQTNMNVNEVVANRACELLG 121

Query: 121 YA------VSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELA 174
                   V PNDHVN+ QSSNDV P A+ ++AA+ +   LLP+L  L   L  +  E A
Sbjct: 122 GVRGDRKLVHPNDHVNLCQSSNDVFPAAMHIAAALGLRSMLLPSLQALEAELEARAHEFA 181

Query: 175 DVVKTGRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINAD 234
            +VK GRTHL DA+P+T  QE  G+ +Q+    + +   +  + ALA GGTAVGTG+NA 
Sbjct: 182 GLVKVGRTHLQDAVPLTLGQEFSGYAAQLALCRRQLEGMMPLLCALALGGTAVGTGLNAH 241

Query: 235 PRFARIFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMN 294
           P FAR     L+  + + F P DN F  L+  + +V  SG L+T AVAL K+ ND+R + 
Sbjct: 242 PEFARRAVARLAGYTGLPFLPVDNPFAALAGHEALVAYSGALRTLAVALFKVGNDIRLLA 301

Query: 295 SGPLAGLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLN 354
           SGP  G+GE+EL   +PGSSIMPGKVNP   EA+TMVA QV+G D  + +AG  G+ +LN
Sbjct: 302 SGPRCGIGELELPANEPGSSIMPGKVNPTQCEALTMVAVQVMGLDNAVGIAGSQGHLELN 361

Query: 355 VMLPVIAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYL 414
           V  P+IA N+LES  LL ++  +    A+   +   + +   + ++ +LVTAL+  +GY 
Sbjct: 362 VFKPLIARNVLESARLLADSMRSFRMHAVRGLRAVPERIASHVDRSLMLVTALSRHVGYD 421

Query: 415 KAADIAKKAYQQGRAILDVAAEETDLDRATLEALLDPKKL 454
           +AA++A  A+ +G  + +       +D    +  +DP ++
Sbjct: 422 RAAEVAHLAHAEGLTLREACLRLGLMDGEAFDRAVDPVRM 461