Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., putative Cytochrome bd2, subunit I from Pseudomonas fluorescens FW300-N2E2

 Score =  402 bits (1034), Expect = e-117
 Identities = 209/443 (47%), Positives = 285/443 (64%), Gaps = 6/443 (1%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           L+ L L+RIQFA  ISFHILFP ITI L   L   +  +L+T+   + DLY+FW K+FA+
Sbjct: 4   LEALDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDTYRDLYHFWSKIFAV 63

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            F +GVVSG+ M++QFGTNW  F +  G V GPLL YEV+TAFF+EA FLGVMLFG  RV
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
              LH  STV+VA+GT +S FWIL  NSWM TP GYE+IDG V    W  V+FNPS PYR
Sbjct: 124 GRGLHFFSTVMVAIGTLISTFWILSSNSWMQTPQGYEIIDGRVIPVDWLAVVFNPSFPYR 183

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
           L H   A+ +  +F +   +A+ +LR     A +  L +A+ +A L  P+Q ++GD HGL
Sbjct: 184 LLHMSTAAFVATAFFVGSSAAWHLLRGRDTPAIRRMLSMAMWMALLVAPIQAVIGDFHGL 243

Query: 242 NTLEHQPAKIAAMEGVWQT--ERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNG 299
           NTL+HQPAKIAA+EG W+       PL+LF  P+ +     FA+ IP L SLILTH ++ 
Sbjct: 244 NTLKHQPAKIAAIEGHWENVGNEPTPLILFGWPDMQAEKTKFAVEIPYLGSLILTHSLDK 303

Query: 300 EIVGLDAFAP-DHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPL--PKPYMYAL 356
           ++  L  F P D P    +F+ FRVMVG+G+LM+       W + RN  +   +P++Y +
Sbjct: 304 QVPALKEFPPEDRPNSTIVFWSFRVMVGLGLLMIFTGLCSLW-LRRNDRIYQSRPFLYMV 362

Query: 357 IGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLL 416
           + M  SG VA +AGW+ TEIGRQPW+V G++RTA+A +  + + + I+L L+++ Y  L 
Sbjct: 363 LWMGPSGLVAILAGWFTTEIGRQPWVVYGLMRTADASSGHSFTQMSITLVLFVVVYFALF 422

Query: 417 VAYVHTLFYLARKTGHAPQVSPS 439
            A +  +  L RK   A +  PS
Sbjct: 423 GAGLSYMMRLVRKGPEAHETEPS 445