Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

 Score =  196 bits (498), Expect = 2e-54
 Identities = 106/308 (34%), Positives = 164/308 (53%), Gaps = 3/308 (0%)

Query: 7   LSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALTFALG 66
           LSR+QFA    +H LF  +T+ L ++L   +  Y+ T    + D+  FW K+F + FALG
Sbjct: 9   LSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKLFGINFALG 68

Query: 67  VVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVPEWLH 126
           V +G+TM FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R+ +  H
Sbjct: 69  VTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSKVQH 128

Query: 127 TLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGV--VHVTSWKEVIFNPSMPYRLAH 184
              T LVA+G++LSA WIL+ N WM  P G E       + +  +  ++FNP    +  H
Sbjct: 129 LAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNPVAQVKFVH 188

Query: 185 TLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGLNTL 244
           T+ A  +T +  +  IS++ +L+      A+    +A      +    I++GD  G    
Sbjct: 189 TVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILGDESGYEIG 248

Query: 245 EHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDMNGEIVG 303
           + Q  K+AA+E  W T    A   LF LPN++    D+ + IP    LI T  ++ EI G
Sbjct: 249 DVQKVKLAAIEAEWDTHPAPAGFTLFGLPNQQEMRTDYEVKIPYALGLIATRSVDEEIKG 308

Query: 304 LDAFAPDH 311
           +     +H
Sbjct: 309 IKQLVAEH 316



 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYM--YALIGMTFSGWVATIA 369
           P V  LF+ FRVMV  G LMLL+    +W   +     KP++  +AL  +    W+A   
Sbjct: 383 PNVFSLFWTFRVMVAAGFLMLLLFALASWASIKRDAESKPWLLRFALFSLPLP-WIAAQT 441

Query: 370 GWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLAR 428
           GWYV E GRQPW ++ VL T  + + +A+  +  SL   +  Y +LLV  +  +   AR
Sbjct: 442 GWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIALVAFYSLLLVIEMFLMIRFAR 500