Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

 Score =  400 bits (1028), Expect = e-116
 Identities = 207/447 (46%), Positives = 285/447 (63%), Gaps = 7/447 (1%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           L+ L L+RIQFA  I+FHI+FP ITI L   L   +  +L+T+   + DLY+FW+K+FA+
Sbjct: 4   LEALELARIQFAFTITFHIIFPAITIGLASFLAVLEALWLKTRQEVYRDLYHFWLKIFAV 63

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            F +GVVSGI M++QFGTNW  + E  G+V GPLL YEV+TAFF+EA FLGVMLFG  RV
Sbjct: 64  NFGMGVVSGIVMAYQFGTNWSAYSEFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
            E LH  ST++VA+GT +S FWIL  NSWMHTP G+E+IDG+V    W  +IFNPS PYR
Sbjct: 124 GERLHFFSTLMVAIGTLISTFWILASNSWMHTPQGHEIIDGIVVPVDWFAIIFNPSFPYR 183

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
           LAH  +A+ L  +F +   +A+ +LR     A +  L +A+ +A L  PVQ ++GD HGL
Sbjct: 184 LAHMAVAAFLATAFFVGASAAWHLLRGKDTPAIRKMLSMAMWMALLVAPVQAVIGDFHGL 243

Query: 242 NTLEHQPAKIAAMEGVWQTERG--APLLLFALPNEETRSNDFALGIPNLASLILTHDMNG 299
           NTLE+QPAKIAAMEG W    G   PLLLF  P+ E     + + IP LAS+IL H +  
Sbjct: 244 NTLEYQPAKIAAMEGHWDNSEGGPTPLLLFGWPDMEAEETRYKIEIPYLASIILKHSLTE 303

Query: 300 EIVGLDAFAP-DHPPVAPLFFGFRVMVGVGVLMLLVS-WFGAWRVWRNKPLPKPYMYALI 357
            I  L  F P D P    +F+ FR+MV +G+LM++   W    R        +P++  ++
Sbjct: 304 PIPALKDFPPEDRPNSTIVFWTFRIMVALGLLMIVTGIWSLLLRRGDRLYSSRPFLRLVL 363

Query: 358 GMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLV 417
            M  SG +A +AGWY TEIGRQPW++ G++RTA+AV+   +  +G++L ++++ Y     
Sbjct: 364 LMGPSGLIAILAGWYTTEIGRQPWVIYGLMRTADAVSNHGAGQLGLTLAMFVVVY---FA 420

Query: 418 AYVHTLFYLARKTGHAPQVSPSSTKAA 444
            +   + Y+ R     P VS    K A
Sbjct: 421 VFGVGMVYVLRLVKKGPVVSEGREKGA 447