Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., cytochrome bd-I oxidase subunit I (RefSeq) from Shewanella amazonensis SB2B

 Score =  208 bits (529), Expect = 4e-58
 Identities = 112/314 (35%), Positives = 170/314 (54%), Gaps = 7/314 (2%)

Query: 3   DTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALT 62
           + + LSR+QFA    +H LF  +T+ + ++L   +  Y+ T    + D+  FW K+F + 
Sbjct: 5   EVVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTNKQIYKDMTKFWGKLFGIN 64

Query: 63  FALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVP 122
           FALGV +G+ M FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R  
Sbjct: 65  FALGVTTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRFS 124

Query: 123 EWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAG----YEVIDGVVHVTSWKEVIFNPSM 178
           +  H   T L+A+GT++SA WILV N WM  P G    YE +   + +TS+ EV+FNP  
Sbjct: 125 KRQHLTVTWLMALGTNMSALWILVANGWMQNPVGSVFNYETMR--MEMTSFAEVVFNPVA 182

Query: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238
             +  HT+ +  +  +  +  ISAY +L+      A+    +A S    +I   I++GD 
Sbjct: 183 QVKFVHTVASGYVAGAMFVLAISAYYILKKRDLPFARRSFAIAASFGMASILSVIVLGDE 242

Query: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297
            G    E Q  K+AA+E  W TE   A   +   PN+ET   D A+ IP    +I T  +
Sbjct: 243 SGYKVGEVQRVKLAAVEAEWHTEPAPASFTVVGFPNQETMHTDGAIKIPYAMGIIATRSL 302

Query: 298 NGEIVGLDAFAPDH 311
           + E+ GL     +H
Sbjct: 303 DEEVTGLRDLVDEH 316



 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 10/133 (7%)

Query: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMY--ALIGMTFSGWVATIA 369
           P VAPLF+ FRVMVG+GV+ML V     W+  R++   K ++   AL  +    W+A   
Sbjct: 383 PSVAPLFWSFRVMVGLGVIMLFVFAAAFWQSTRHRIEEKKWVLKAALYSLPLP-WIAIEC 441

Query: 370 GWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLARK 429
           GW+V E GRQPW +S VL T  + + +  S +  S+    + Y VLLV  +  +F  AR 
Sbjct: 442 GWFVAEYGRQPWTISEVLPTFMSASSLNPSDLWFSIASITLFYSVLLVIELFLMFKYAR- 500

Query: 430 TGHAPQVSPSSTK 442
                 + PSS K
Sbjct: 501 ------LGPSSLK 507