Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., cytochrome ubiquinol oxidase subunit I from Pseudomonas sp. BP01

 Score =  395 bits (1016), Expect = e-114
 Identities = 202/438 (46%), Positives = 287/438 (65%), Gaps = 7/438 (1%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           L  L L+RIQF   I+FHI+FP ITI L   L   +  +L  + + +LDLY+FW K+FA+
Sbjct: 4   LTALELARIQFGFTITFHIIFPAITIGLAAFLAVLEGLWLWKKDNAYLDLYHFWSKIFAV 63

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            FA+GVVSG+ M++QFGTNW  + +  G++ GPLL YEV+TAFF+EA FLGVMLFG  +V
Sbjct: 64  NFAMGVVSGLVMAYQFGTNWSFYSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWHKV 123

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
              LH  +TV+VAVGT +SA WIL  NSWM TP G+EVI+GVV    W  +IFNPS PYR
Sbjct: 124 GRGLHFFATVMVAVGTMISATWILASNSWMQTPQGHEVINGVVVPVDWFAIIFNPSFPYR 183

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
           LAH + A+ L+ +  +   +A+ +LR     A +    +A+ +     P+Q+++GD+HGL
Sbjct: 184 LAHMVTAAMLSTALFVGASAAWHLLRGNNTPAVRRMFSMALWMLLFTAPLQVVIGDVHGL 243

Query: 242 NTLEHQPAKIAAMEGVWQTE--RGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNG 299
           NTL+HQPAKIAA+EG W     +G PL+LF +P+ E  +  + + IPNLAS+ILTH + G
Sbjct: 244 NTLKHQPAKIAAVEGHWSNTPGQGVPLILFGIPDMEAETTRYKVEIPNLASMILTHSLRG 303

Query: 300 EIVGLDAF-APDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMYAL-I 357
           +I  L  F   D P    LF+ FRVMVG+G+LM+++  +G W+ WR +      +    +
Sbjct: 304 QIPALKDFPKEDRPNATILFWCFRVMVGLGLLMVVLGLYGTWQRWRGRLYESRGLARFAL 363

Query: 358 GMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLV 417
            M  SG VA +AGWYVTEIGRQPW+V G++RT +AV+  ++ ++ + L + ++ Y+ +  
Sbjct: 364 WMGPSGLVALLAGWYVTEIGRQPWVVYGLMRTKDAVSDHSALTLSVGLVVLVVMYIGVFG 423

Query: 418 AYVHTLFYLARKTGHAPQ 435
             V    Y+ R  G  PQ
Sbjct: 424 TGV---AYMLRLVGKGPQ 438