Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., cytochrome bd ubiquinol oxidase, subunit I (RefSeq) from Shewanella loihica PV-4

 Score =  229 bits (585), Expect = 1e-64
 Identities = 152/513 (29%), Positives = 235/513 (45%), Gaps = 83/513 (16%)

Query: 3   DTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALT 62
           + + LSR+QFA    +H LF  +T+ L ++L   +  Y+ T    + D+  FW K+F + 
Sbjct: 5   EVVELSRLQFALTAMYHFLFVPLTLGLAFLLAIMESLYVMTNKQIYKDMTKFWGKLFGIN 64

Query: 63  FALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVP 122
           FALGV +G+ M FQFGTNW  +   VG++ G  L  E + AFF+E+T +G+  FG  R  
Sbjct: 65  FALGVTTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTLVGMFFFGWDRFS 124

Query: 123 EWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAG----YEVIDGVVHVTSWKEVIFNPSM 178
           +  H   T LVA+G+++SA WILV N WM  P G    YE +   + +TS+ EV+FNP  
Sbjct: 125 KRQHLAVTWLVALGSNMSALWILVANGWMQNPVGSVFNYETMR--MEMTSFAEVLFNPVA 182

Query: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238
             +  HT+ +  +  +  +  IS+Y +L+      A+    +A S    +I   I++GD 
Sbjct: 183 QVKFVHTVASGYVAGAMFVLAISSYYILKKRDLPFARRSFAIAASFGMASILSVIVLGDE 242

Query: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297
            G    E Q  K+AA+E  W TE   A       PN+ET   D+A+ IP    +I T  +
Sbjct: 243 SGYKVGEAQRVKLAAIEAEWHTEPAPAAFTAVGFPNQETMHTDYAIKIPYAMGIIATRSI 302

Query: 298 NGEIVGLDAFAPDH-----------------------PPVAPLFFGFRVMVGVGVLM--- 331
           + E+ G+     +H                       P +   F   +V +G G+L+   
Sbjct: 303 DEEVTGIRDLIVEHEERIRNGMKAYAMLTELRAGKETPELRAAFEEAKVDLGYGLLLKRY 362

Query: 332 ----------------------------------------LLVSWFGAWRVWRNKPLPKP 351
                                                   L V     W+  R++   KP
Sbjct: 363 TDNVVDATEEQIKAAAKDSIPSVAPMFWSFRVMVGLGVVMLFVFAAAFWQSTRHQIEEKP 422

Query: 352 YMY--ALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYL 409
           ++   AL  +    W+A   GW+V E GRQPW +S VL T  + + + ++ +  S+    
Sbjct: 423 WVLKAALYSLPLP-WIAIECGWFVAEYGRQPWTISEVLPTFMSASSLTAADLWFSIISIT 481

Query: 410 ITYVVLLVAYVHTLFYLARKTGHAPQVSPSSTK 442
           + Y VLLV  +  +   ARK        PSS K
Sbjct: 482 LFYTVLLVIELFLMIKFARK-------GPSSLK 507