Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., cytochrome bd ubiquinol oxidase subunit I (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  302 bits (774), Expect = 1e-86
 Identities = 166/431 (38%), Positives = 246/431 (57%), Gaps = 5/431 (1%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           +D +MLSR+QFA  + FH +F  +T+ L  ++   +  Y RT    +  +  FW K+F +
Sbjct: 1   MDVVMLSRLQFAVAVFFHFIFVPLTLGLSVLIAVMQTIYYRTGNETYKRMAKFWGKLFLI 60

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            F LGVV+GIT+ FQFGTNW  + E VG++ G LL  E   AFF+E+TFL V +FG  RV
Sbjct: 61  NFTLGVVTGITLEFQFGTNWSRYSEYVGDIFGSLLAIEATLAFFLESTFLAVWVFGWERV 120

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
            + +H  +   VA  +++S  WI++ N WM  P GY + +    + ++  V+ NP    +
Sbjct: 121 SKKMHLFAIWAVAFASNMSGLWIILANGWMQNPVGYVIRNNRAELDNFFTVLSNPYAWGQ 180

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
             H + AS + A F + G+SA+ +LR  +        K+A         +  L G  HG 
Sbjct: 181 FFHNMFASWMLAGFFVLGVSAWHLLRRNEEDFFNRSFKLAAGFTLALALLVALQGHNHGN 240

Query: 242 NTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDF-ALGIPNLASLILTHDMNGE 300
                QPAK+AAME  W+T++ AP+ L A+PNE    N   A GIP + SL+  +D + E
Sbjct: 241 TVARLQPAKLAAMESHWETQKSAPMYLLAVPNESAEGNAIQAFGIPGVLSLLAFNDPSAE 300

Query: 301 IVGLDAF-APDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMYALIGM 359
           + GL  F   D PPV   F  FRVMVG+G L  L++  GA  ++RN+   KP++   +  
Sbjct: 301 VKGLKDFPKEDRPPVLLTFLNFRVMVGLGTLFPLLA--GAAFLFRNRLQDKPWLLKALPW 358

Query: 360 TFS-GWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVA 418
                ++A +AGW V EIGRQPW+V G++RT +AV+PV +SSV +SL  +   Y +L V 
Sbjct: 359 AIPLPYLAIMAGWAVAEIGRQPWIVYGMMRTTDAVSPVPASSVAVSLLAFGAVYTLLGVL 418

Query: 419 YVHTLFYLARK 429
            ++ L   ARK
Sbjct: 419 DIYLLRKYARK 429