Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10) from Paraburkholderia bryophila 376MFSha3.1

 Score =  312 bits (800), Expect = 1e-89
 Identities = 169/439 (38%), Positives = 263/439 (59%), Gaps = 15/439 (3%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           ++ L L+R QFA    FHIL+P +TI+L   L+  +  +++T    W     FW K+  L
Sbjct: 3   VEALNLARGQFAMTAIFHILWPILTISLSAFLLVVETLWVKTSDVVWYRHARFWSKLLIL 62

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            FA+GVVSGI M FQFGTNW  F +  G   G +LG+E   AF +EA F+G+M+ G  RV
Sbjct: 63  NFAVGVVSGIPMEFQFGTNWGPFSQYTGQFFGNILGFEGAMAFMLEAGFVGIMMLGWDRV 122

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
           P+ +H  +T +VA+G+S+SAFWI+V NSW+ TP G  ++DG + VT + + IFNP M + 
Sbjct: 123 PKGVHLFATGMVALGSSISAFWIMVANSWLQTPTGVALVDGKLIVTDYVKAIFNPDMAWG 182

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
           ++H   A+  T   +IAGISAY +L+    +      K+A+ + A   PVQI +GD  G+
Sbjct: 183 VSHMWFAALETGLVVIAGISAYYLLKRRHPEFFVRSFKLALLILAFVAPVQIWLGDSSGV 242

Query: 242 NTLEHQPAKIAAMEGVWQTE---RGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMN 298
           +  E QPAK AA+EG WQT     GA   L A PN   + ND++L +P + S++ TH ++
Sbjct: 243 DVFETQPAKGAAIEGHWQTNAPGTGASWSLLAWPNAAKQDNDWSLEVPGMLSILGTHSLH 302

Query: 299 GEIVGL-DAFAPDHPPVAP-LFFGFRVMVGVGVLMLLVSWFGAWRVWRNKP------LPK 350
           G++ G+ D    D PP+ P L++ FRVM GVG L +L++++  + + + +         +
Sbjct: 303 GKVTGMRDIPVADQPPMLPLLYYAFRVMAGVGFLFMLLAFWTLYALRKARGRVDALLAQR 362

Query: 351 PYMYALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLI 410
             + A +      ++A   GW V E+GRQPW+V G+LRT  A + + + ++  S+ ++L 
Sbjct: 363 KLLLAWVLAIPLPYIAVECGWIVREVGRQPWVVYGLLRTDHAASSIPAGAIAGSMIMFLT 422

Query: 411 TYVVLLVAYVHTLFYLARK 429
            +VVL+ ++    F  AR+
Sbjct: 423 FFVVLIASF----FVFARR 437