Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., cytochrome bd ubiquinol oxidase, subunit I (RefSeq) from Shewanella sp. ANA-3

 Score =  232 bits (592), Expect = 2e-65
 Identities = 154/513 (30%), Positives = 234/513 (45%), Gaps = 83/513 (16%)

Query: 3   DTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALT 62
           + + LSR+QFA    +H LF  +T+ L ++L   +  Y+ T    + D+  FW K+F + 
Sbjct: 5   EVVELSRLQFALTAMYHFLFVPLTLGLAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 64

Query: 63  FALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVP 122
           FALGV +G+ M FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R  
Sbjct: 65  FALGVSTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRFS 124

Query: 123 EWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAG----YEVIDGVVHVTSWKEVIFNPSM 178
           +  H  +T LVA G++ SA WILV N WM  P G    YE +   + +TS+ +VIFNP  
Sbjct: 125 KRQHLATTWLVAFGSNFSALWILVANGWMQNPVGSVFNYETMR--MEMTSFADVIFNPVA 182

Query: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238
             +  HT+ +  +T +  +  IS+Y +L+      A+    +A S    +I   I++GD 
Sbjct: 183 QVKFVHTVASGYVTGAMFVLAISSYYILKKRDLPFARRSFAIAASFGMASILSVIVLGDE 242

Query: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297
            G    E Q  K+AA+E  W TE   A       PN+ET   DFA+ IP    ++ T  +
Sbjct: 243 SGYKVGEAQRVKLAAIEAEWHTEPAPAAFTAVGFPNQETMHTDFAVKIPYAMGIVATRSL 302

Query: 298 NGEIVGLDAFAPDH-----------------------PPVAPLFFGFRVMVGVGVL---- 330
           + E+ GL     +H                       P +   F   +V +G G+L    
Sbjct: 303 DEEVTGLRDLVAEHEVRIRNGMKAYEMLVKLRAGDKSPELRDAFEAAKVDLGYGLLLKRY 362

Query: 331 ---------------------------------------MLLVSWFGAWRVWRNKPLPKP 351
                                                  ML V     W+  R++   K 
Sbjct: 363 TDNVVDATEEQIKAAAKDSIPNVAPIFWSFRVMVGLGFVMLFVFAAAFWQSTRHQIEEKK 422

Query: 352 YMY--ALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYL 409
           ++   AL  +    W+A   GW+V E GRQPW +S VL T  + + + +  +  S+    
Sbjct: 423 WVLKAALFSLPLP-WIAIECGWFVAEYGRQPWTISEVLPTFMSASSLTTGDLWFSIISIS 481

Query: 410 ITYVVLLVAYVHTLFYLARKTGHAPQVSPSSTK 442
           + Y VLLV  +  +   AR       + PSS K
Sbjct: 482 LFYTVLLVIEIFLMLKFAR-------LGPSSLK 507