Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., cytochrome bd ubiquinol oxidase, subunit I (RefSeq) from Shewanella sp. ANA-3

 Score =  390 bits (1001), Expect = e-113
 Identities = 196/417 (47%), Positives = 282/417 (67%), Gaps = 10/417 (2%)

Query: 3   DTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFALT 62
           D  +L+RIQFA  +SFHI+FP ITI L   L   +  +L+T    +  LY FWVK+FA+ 
Sbjct: 5   DATVLARIQFAFTVSFHIIFPAITIGLATYLAVLEGLWLKTNNQIYQQLYQFWVKIFAIN 64

Query: 63  FALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRVP 122
           F +GVVSGI M++QFGT+W GF    G+V GPLL YEV+TAFF+EA FLGVMLFG+ +V 
Sbjct: 65  FGMGVVSGIVMAYQFGTHWSGFSAFAGSVTGPLLTYEVLTAFFLEAGFLGVMLFGQNKVG 124

Query: 123 EWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYRL 182
           + LH  +T +VA GT +S FWIL  NSWMHTP G E+ID  V    W +++FNPS PYRL
Sbjct: 125 KKLHFFATCMVATGTVISTFWILASNSWMHTPQGVEIIDNRVVPIDWWQIVFNPSFPYRL 184

Query: 183 AHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGLN 242
            H  +A+ L+++F +   +A+ +L+     A +  L +A+ +A +  P+Q ++GD HGLN
Sbjct: 185 THMTVAAFLSSAFFVGASAAWHLLKGNDTPAIRKMLSMAMWMALIVAPLQAVIGDFHGLN 244

Query: 243 TLEHQPAKIAAMEGVWQTE--RGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGE 300
           TLE+QP KIAAMEG W+ E     PL+LFA+P+ + ++N F+L IP LASLIL HD+  +
Sbjct: 245 TLEYQPVKIAAMEGHWRNEGDEPTPLILFAMPDMDKQTNHFSLEIPGLASLILKHDITKQ 304

Query: 301 IVGLDAF-APDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVW--RNKPLPKPYMYALI 357
           +  L  F A D P V+ +F+ FRVMVG+GVLM+L    G W ++  R + L    ++  +
Sbjct: 305 VPALTEFPAEDWPNVSLVFWSFRVMVGLGVLMILA---GVWSLYLRRKQTLYSNRLFLRL 361

Query: 358 GMTF--SGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITY 412
            +    +G +AT+AGW+ TE+GRQPW++ G++RT +AV+  + + + ISL +++I Y
Sbjct: 362 VLLLGPAGLIATLAGWFTTELGRQPWVIQGLMRTQDAVSSHSVTHLSISLMMFVICY 418