Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., putative Cytochrome bd2, subunit II from Xanthomonas campestris pv. campestris strain 8004

 Score =  205 bits (522), Expect = 1e-57
 Identities = 122/337 (36%), Positives = 185/337 (54%), Gaps = 17/337 (5%)

Query: 4   YLPEIYLLLLGFTVFMYAVLDGYDLGVGILLP-RNDVAQRDRMIASIGPFWDANETWLVL 62
           +LP ++  ++GF V MY VLDG+ LG+G+L P   D  + D M+ +  P WD NETWLVL
Sbjct: 6   WLPVVWFGVIGFGVLMYVVLDGFVLGLGMLAPFARDEQEVDLMMNTAAPIWDGNETWLVL 65

Query: 63  AVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGS 122
               L  AFPTA+++I + LYLP  LM++AL+ RGVAF+FR KA    +  W L F  GS
Sbjct: 66  GGAGLFAAFPTAYAVILSGLYLPVLLMVMALVFRGVAFEFRFKAHRSRR-LWTLSFIGGS 124

Query: 123 LLAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKT 173
           +L A  QG ++G  V G       Y          F +L+ + +   Y  +G  WL+LKT
Sbjct: 125 MLTAFAQGIILGALVEGMALDNGRYVGGVFGWFSPFTILTGVALVFGYALLGSTWLILKT 184

Query: 174 EGELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFAT 233
           +G     A + +R    +    ++ VS   P+++S V  RWF       L+P+P+I    
Sbjct: 185 DGRTHELARQLTRPLVGVVVAFMVLVSAWLPFLSSHVMARWFEHGNFWWLSPIPVITAVV 244

Query: 234 ILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPE 293
            +++ R      + N A    PF   + IF L F+GL    +P +VP   T  QAA+ P 
Sbjct: 245 AMLLWR--AGNTSRNHAS---PFLLTLAIFVLGFIGLVLGMWPYLVPPSYTIWQAAAPPS 299

Query: 294 TLMVVGIGVVIVMPTILLYTFFVYRIFKGK-ATDLSY 329
           + +   +G+++++P +L YT + YR+F+GK A D+ Y
Sbjct: 300 SQIFPMVGLIVLLPLVLGYTAWSYRVFRGKIAADVGY 336