Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., cytochrome d ubiquinol oxidase subunit II from Synechocystis sp000284455 PCC 6803

 Score =  211 bits (536), Expect = 3e-59
 Identities = 117/336 (34%), Positives = 188/336 (55%), Gaps = 23/336 (6%)

Query: 1   MMQYLPEIYLLLLGFTVFMYAVLDGYDLGVGIL-LPRNDVAQRDRMIASIGPFWDANETW 59
           +  +LP+++  +LG  +F+Y +LDG+DLGVGIL L  +   +R  ++ S+G  WDANETW
Sbjct: 7   LQHFLPQVWFFILGLFLFLYVLLDGFDLGVGILSLTASSEERRSILMTSLGNVWDANETW 66

Query: 60  LVLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFK 119
           LVL  G L  AFP A++ I   LYLP  +M++ LI+R V+F+FR    A+ K  W++ F 
Sbjct: 67  LVLMGGSLFGAFPLAYATILNALYLPAVIMVVGLILRAVSFEFR--ENANRKLVWNIAFG 124

Query: 120 IGSLLAALTQGYMIGRYVVGFESAPEAYAF----------AVLSALCVAAAYVYIGGAWL 169
           +GS LAAL QG+ +G    G     + +            +V+ AL +   YV IG  +L
Sbjct: 125 VGSFLAALGQGFALGSVFEGITVDAQGHFAGTMWDWLTWRSVIVALTLIQGYVLIGSTYL 184

Query: 170 VLKTEGELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPII 229
           +LKTEGELQ    + +  A W    G + +++  P  +     + F+ P V + A +P++
Sbjct: 185 ILKTEGELQKTYFKTAAIATWTTLAGAVFITISTPAFSEEARAQLFTAPLVYIFAAIPLV 244

Query: 230 --VFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQ 287
             +F  +L+   YL+   T        P     L+F LSF+GL +  FP I+P  +T  +
Sbjct: 245 GLLFIGLLLRSLYLREENT--------PIIWTFLVFSLSFIGLGFIIFPNIIPPSVTIYE 296

Query: 288 AASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
           AA++P +L+ +   +  ++P +L Y  + Y +F+GK
Sbjct: 297 AAAAPSSLVFMLTFIGFLIPILLFYNIYNYLVFRGK 332