Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome bd-I oxidase subunit II (RefSeq) from Shewanella amazonensis SB2B

 Score =  119 bits (299), Expect = 9e-32
 Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 58/365 (15%)

Query: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLP--RNDVAQRDRMIASIGPFWDANETWLVLAVG 65
           I+  L+G     +AV DG+D+GVG LLP    D   R  MI ++ P WD N+ WL+ A G
Sbjct: 10  IWWALVGVLFIGFAVTDGFDMGVGALLPVIGKDDTDRRVMINTVAPHWDGNQVWLITAGG 69

Query: 66  ILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADH-KDHWDLCFKIGSLL 124
            L  A+P  +++ F+  Y+   ++L+AL +R V FD+R+K +A   +  WD    +GS +
Sbjct: 70  ALFAAWPMVYAVSFSGFYVAMVIVLLALFLRPVGFDYRSKIEAPKWRKSWDWALFVGSFV 129

Query: 125 AALTQGYMIGRYVVG----FESAPEA----------YAFAVLSALCVAAAYVYIGGAWLV 170
             L  G   G  + G    F+    A            F +L+ L   + ++  G  WL 
Sbjct: 130 PPLIIGVAFGNLLQGVPFNFDEFLRAKYHGGLFGLLNPFGLLAGLVSVSMFMMQGATWLQ 189

Query: 171 LKTEGELQVRAARWSR-----------KAGWLAALGVLSVSLV---------NP------ 204
           +KTEGEL+VRA   ++            AG+  A G+    +          NP      
Sbjct: 190 MKTEGELRVRATNAAQLLALLLVVLFAAAGFWVANGIDGYVITSAIDTHAASNPVGKTVE 249

Query: 205 WVNSAVAERWFSFPEVILLAPVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFG 264
            V+ A    + ++P  +    + + +   +++  R+       N +G  + F  + +   
Sbjct: 250 LVSGAWMANYQTYPITMAFPVLGLAMPVLVILASRF-------NRSGFAFLFSSLAVAGV 302

Query: 265 LSFLGLAYSFFPEIVPG------IMTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVYR 318
           +   G A   FP ++P        +T   A +S  TL V+    +I +P +L YT + Y 
Sbjct: 303 ILTCGAA--MFPFVMPSSLEPGVSLTMWDATASEMTLTVMTWAAIIFVPIVLSYTIWTYY 360

Query: 319 IFKGK 323
              G+
Sbjct: 361 KMYGR 365