Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., cytochrome d ubiquinol oxidase subunit 2 from Phaeobacter inhibens DSM 17395

 Score =  214 bits (545), Expect = 2e-60
 Identities = 139/337 (41%), Positives = 191/337 (56%), Gaps = 25/337 (7%)

Query: 1   MMQYLPEIYLLLLGFTVFMYAVLDGYDLGVGILLPRNDVAQRDR--MIASIGPFWDANET 58
           M+  L  I+  ++ F V  Y VLDG+DLGVGIL P    ++RDR  M+ SI P WD NET
Sbjct: 1   MLFDLSFIWAGIIAFAVLTYVVLDGFDLGVGILFPFA-TSERDRATMMNSIAPVWDGNET 59

Query: 59  WLVLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCF 118
           WLVL  G L   FP A+++I   LY+P  LML+AL+ RGVAF++R +     +  WD  F
Sbjct: 60  WLVLGGGGLFAVFPLAYAVIMPALYMPITLMLLALVFRGVAFEYRWRT-TRWRGVWDSAF 118

Query: 119 KIGSLLAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWL 169
             GS++AA  QG  +G  V G E    AYA         F+VL+ L V   Y  +G  WL
Sbjct: 119 FGGSVVAATMQGIALGALVQGVEVEGRAYAGGWWDWLTPFSVLTGLAVLTGYALLGATWL 178

Query: 170 VLKTEGELQVRA---ARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPV 226
            +KTEGELQ +    ARW   AG LAA+ +  VSL+ P+ +     RWF+ P  +    V
Sbjct: 179 NMKTEGELQRQMRGYARW-LGAGTLAAIAL--VSLLTPFQDPEYFRRWFNLPGSLFSLLV 235

Query: 227 PIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQ 286
           P +V      + + LK      DA    PF   + +F LSF+G+  SF+P IVP  +T  
Sbjct: 236 PGLVALCSYALFQGLK---GSRDA---QPFLAALGLFVLSFIGIGISFYPFIVPPGLTIA 289

Query: 287 QAASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
           +AA+  E+LM   +G V+++P IL YT + Y +F+GK
Sbjct: 290 EAAAPDESLMFTLVGAVVLVPLILGYTAYAYWVFRGK 326