Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., cytochrome D ubiquinol oxidase subunit II from Pedobacter sp. GW460-11-11-14-LB5

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 53/349 (15%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGIL----LPRNDVAQRDRMIASIGPFWDANETWL 60
           + ++ +  L   + +Y +L G D G GI+      +N    R  +  +IGP W+AN  WL
Sbjct: 1   MKDVVITFLCMAILLYFLLGGADFGAGIIELFTSTKNRSRTRKTLYHAIGPVWEANHMWL 60

Query: 61  VLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHW--DLCF 118
           ++A+ IL + FP  ++ +   L++P A+MLI +I RG AF FR         HW  +  F
Sbjct: 61  IIAIVILFVGFPHIYTTMSVYLHIPLAIMLIGIIARGTAFVFRHYDAVKDDMHWLYNRIF 120

Query: 119 KIGSLLAALTQGYMIGRYVVGF--ESAPEAYA---------FAVLSALCVAAAYVYIGGA 167
           +  S + AL  G + G  + G     A + Y          F+V   L   A   ++   
Sbjct: 121 RYSSFVTALFLGIIAGSLISGHINTQATDFYTAYISGWLNWFSVAVGLFTVALCGFLAAI 180

Query: 168 WLVLKTEGELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAER-------WFSFPEV 220
           +L+ +T+     R  R+ +KA ++    V+  ++V        A+R       W     V
Sbjct: 181 YLIGETKEVHDKR--RFIKKAEFMNVAAVVFGAMV-----FMAAQRDGIPLIDWVFKSNV 233

Query: 221 ----ILLAPVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFP 276
               I+LA + +I+   +L+  R   +V  +  AG     F V +I     L ++Y+ FP
Sbjct: 234 GLSAIILASLSLILLWYLLL--RGKTKVLRIL-AG-----FQVTMI----LLAISYAHFP 281

Query: 277 EIVPGIMTAQQAASSPETL----MVVGIGVVIVMPTILLYTFFVYRIFK 321
             +   +    A S  ET+     +  +G+ +++ ++L+  F  Y  +K
Sbjct: 282 NFIR--LKNGDAISLLETVGPEKTIYSLGLALLLGSVLILPFLGYLFYK 328