Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome d oxidase cyd, subunit II from Dechlorosoma suillum PS

 Score =  119 bits (297), Expect = 2e-31
 Identities = 106/364 (29%), Positives = 162/364 (44%), Gaps = 53/364 (14%)

Query: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLP--RNDVAQRDRMIASIGPFWDANETWLVLAVG 65
           I+ LL+G  +  +A++DG+D+GVGILLP    D   R  MI ++ P WD N+ W + A G
Sbjct: 11  IWWLLVGVLLIGFAIMDGHDMGVGILLPILGRDDTDRRVMINTVAPHWDGNQVWFITAGG 70

Query: 66  ILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAK-AKADHKDHWDLCFKIGSLL 124
            +  A+P  ++  F+ +Y    L+L AL  R V F++R+K      +  WD     GS +
Sbjct: 71  AIFAAWPFVYATAFSGMYWALLLVLFALFFRPVGFEYRSKLPHPAWRSAWDWGLFAGSAV 130

Query: 125 AALTQGYMIGRYVVGF-----ESAPEAYA---------FAVLSALCVAAAYVYIGGAWLV 170
            AL  G   G    G      E+    Y          FA+L  +   +     G  +L 
Sbjct: 131 PALVFGVAFGNLFQGVPFHLDETMRSFYTGSFWALLNPFALLCGVVSLSLLALQGATFLA 190

Query: 171 LKTEGELQVRA------------ARWSRKAGWLAAL-GVLSVSL------VNPWVNSAVA 211
            +TEGELQ RA            A +S    W+  L G +  S+      +NP +   V 
Sbjct: 191 HRTEGELQARARGAGTVLAVLLLAAFSAAGVWVGRLDGFVIQSIADVGGALNPLMKEVVR 250

Query: 212 E--RWF-SFPEVILLAPVPIIVFATILVVDRYLKRVP-TVNDAGVQWPFFGVVLIFGLSF 267
           +   WF ++ +  LL  VP + +A  L+    L+     V   G       V+L  G+  
Sbjct: 251 QPGAWFANYQKYPLLWAVPALAYAGGLLALACLRAGKILVAFVGSSVACLAVILTAGV-- 308

Query: 268 LGLAYSFFPEIVP------GIMTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVYRIFK 321
                + FP ++P        +TA  A SS  TL V+    +I  P ++ YT + YR+  
Sbjct: 309 -----ALFPFVLPSSTLPKASLTAWDATSSYVTLNVMLYVALIFTPIVIAYTGWAYRVMA 363

Query: 322 GKAT 325
           GK T
Sbjct: 364 GKVT 367