Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ubiquinol oxidase subunit II from Klebsiella michiganensis M5al

 Score =  213 bits (541), Expect = 7e-60
 Identities = 124/332 (37%), Positives = 189/332 (56%), Gaps = 17/332 (5%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLPRNDVA-QRDRMIASIGPFWDANETWLVLA 63
           +P I+ +++ F   MY V+DG+DLG+G++      A +RD M+ S+ P WD NETWLVL 
Sbjct: 5   IPVIWFVIIVFATLMYIVMDGFDLGIGMVFSFVPNANERDVMMNSVAPVWDGNETWLVLG 64

Query: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123
              L  AFP A+++I   L +P   MLI LI RGVAF+FR KA   H+  WD  F  GSL
Sbjct: 65  GAGLFGAFPLAYAVIADALTIPLTAMLIGLIFRGVAFEFRFKATPSHQKFWDYSFVGGSL 124

Query: 124 LAALTQGYMIGRYVVGFESAPEAY---------AFAVLSALCVAAAYVYIGGAWLVLKTE 174
           LA  +QG ++G  + GF+ A   +          F++   L +  AY  +G  WL++K+E
Sbjct: 125 LATFSQGIVVGAVISGFDVADRRFIGSALDWLTPFSLFCGLGLVVAYTLLGTTWLIMKSE 184

Query: 175 GELQVRAARWSRKAGWLAALGVLS-VSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFAT 233
           G LQ R    +R+   LA L V++ VS+  P    +VAERWF+ P      PVPI+V   
Sbjct: 185 GALQQRMRELTRRT-LLALLAVIAVVSVWTPLGWHSVAERWFTLPNFYWFVPVPILV--- 240

Query: 234 ILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPE 293
            LV   ++ R+ + N      PF   + +  L F GL  S +P I+P  +T  +A++ P 
Sbjct: 241 -LVFSLWIWRL-SANPNSHARPFLLTLGLIFLGFSGLGISLWPNIIPPHITLWEASAPPA 298

Query: 294 TLMVVGIGVVIVMPTILLYTFFVYRIFKGKAT 325
           + + + +G ++++P IL+YT + Y +F+GK +
Sbjct: 299 SQLFMLVGTLLIIPVILVYTAWSYYVFRGKVS 330