Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ubiquinol oxidase subunit II from Klebsiella michiganensis M5al

 Score =  222 bits (566), Expect = 9e-63
 Identities = 127/331 (38%), Positives = 186/331 (56%), Gaps = 19/331 (5%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLPRN-DVAQRDRMIASIGPFWDANETWLVLA 63
           L  I+ +++ F   MY V+DG+DLG+GIL     D + RD M+ S+ P WD NETWLVL 
Sbjct: 5   LSVIWFVIIVFATLMYIVMDGFDLGIGILFATTRDASDRDVMVNSVAPVWDGNETWLVLG 64

Query: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123
              L  AFP A+++I   L +P  LMLI LI RGVAF+FR  A   H+  WD  F  GS+
Sbjct: 65  GAGLFGAFPLAYAVIIDALAIPLTLMLIGLIFRGVAFEFRFNATPSHRPFWDRAFMGGSI 124

Query: 124 LAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTE 174
           LA  TQG ++G  + GF  +  +++         F +   L +  AY  +G +WLV+K+E
Sbjct: 125 LATFTQGMVVGAVINGFAVSGRSFSGGMFDWLTPFTLFCGLGLCIAYALLGASWLVMKSE 184

Query: 175 GELQVRAARWSRKAGWLAAL--GVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFA 232
             L       +R  G L AL   ++++S+  P    A+AERWFS P +  L PVP++V A
Sbjct: 185 NALHHNMRVTAR--GLLLALLAAIVAISIWTPLAQPAIAERWFSLPNLFFLLPVPLLVAA 242

Query: 233 TILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSP 292
               + R L+     N A    PF   + +  L F GL  S +P I+P  +T  QAA+ P
Sbjct: 243 ISAWLWRALR-----NSASHLLPFVLTLGLIFLGFSGLGISIWPHIIPPGITLWQAAAPP 297

Query: 293 ETLMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
           ++   + +G ++++P IL YTF+ Y +F+GK
Sbjct: 298 QSQGFMLVGALLILPVILGYTFWSYYVFRGK 328