Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., cytochrome d ubiquinol oxidase subunit II from Paraburkholderia graminis OAS925

 Score =  217 bits (553), Expect = 3e-61
 Identities = 123/329 (37%), Positives = 178/329 (54%), Gaps = 16/329 (4%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLP-RNDVAQRDRMIASIGPFWDANETWLVLA 63
           LP I+  +L F V  Y +LDG+DLGVGIL     +   RD M+ SI P WD NETWLVL 
Sbjct: 8   LPLIWAAILAFAVLAYVLLDGFDLGVGILFAVERNREDRDLMVNSIAPVWDGNETWLVLG 67

Query: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123
            G L   FP A+S+I   LY P   ML+AL+ RGVAF+FR +A    +  WD+ F  GS+
Sbjct: 68  GGGLFAVFPLAYSIILPALYPPIIAMLLALVFRGVAFEFRFRATGSGRMWWDVAFFSGSV 127

Query: 124 LAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTE 174
           +AAL QG ++G  + G      +Y+         F VL  L V   Y  +G  WL+ +TE
Sbjct: 128 MAALCQGLVLGGLLQGIHVEGVSYSGGWWDWLTGFTVLCGLAVIVGYALLGSCWLIWRTE 187

Query: 175 GELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATI 234
           G L  R  R++R         ++ V+L  P +  ++AERWF +P +   APVPI++   +
Sbjct: 188 GPLHERCRRYARSMAVAVLALIVVVTLWTPMLQGSLAERWFRWPAIAFTAPVPILL---V 244

Query: 235 LVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPET 294
           L+   + + +          P      IF L + GL  S +P +VP  ++ + AA+   +
Sbjct: 245 LLAAGFWRSLSARRHV---LPLLFAYGIFILCYAGLLISLYPNLVPPAISFRDAAAPHSS 301

Query: 295 LMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
           L+ + +G  I +P IL YT + Y +FKGK
Sbjct: 302 LLFLLVGAAITVPMILGYTVYAYSVFKGK 330