Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., ubiquinol oxidase subunit II, cyanide insensitive from Burkholderia phytofirmans PsJN

 Score =  194 bits (494), Expect = 2e-54
 Identities = 122/336 (36%), Positives = 178/336 (52%), Gaps = 25/336 (7%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLPRND-VAQRDRMIASIGPFWDANETWLVLA 63
           LP I+  ++G  VF+Y +LDG+DLGVG+L P  +   +R+ M+ ++ P WD NET+LVL 
Sbjct: 5   LPVIWAAIIGLGVFIYVMLDGFDLGVGLLFPFFEGKGEREVMLNTVAPVWDGNETFLVLG 64

Query: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKA-KADHKDHWDLCFKIGS 122
              L  AFP  +S +    Y+P  LM++ LI RG AF+ RAKA +  H   WDL F  GS
Sbjct: 65  GAALYGAFPVVYSTLLPANYMPLILMVVGLIFRGAAFELRAKATRTQHA--WDLAFIGGS 122

Query: 123 LLAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKT 173
            LAA+ QG  +G  + G +   + +A         F+V     V   Y  +G  WL+LKT
Sbjct: 123 ALAAMCQGITLGSLLQGIKIVDDKFAGDPFDWFSPFSVFCGFGVLLTYATLGCGWLILKT 182

Query: 174 EGELQVRAARWSRKAGWLAALGVLSVSLVNPWV---NSAVAERWFSFPEVILLAPVPIIV 230
           +GELQ R     R    L A+  L++++V+ W      AV  RWF    +    PVP++V
Sbjct: 183 DGELQRRMREVMRP---LIAVLFLAITIVSLWTVLGLPAVRHRWFFSGNLGWFLPVPVLV 239

Query: 231 FATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAAS 290
              +L + R L R           PF   + I  L + GL  S +P I+P  +T   A+S
Sbjct: 240 VLCVLGIYRSLTRRHEAT------PFLLSLAICFLGYTGLIISIWPYIIPPSLTIWDASS 293

Query: 291 SPETLMVVGIGVVIVMPTILLYTFFVYRIFKGKATD 326
           S  +     +G +IV+P IL+Y    YR+F+GK  +
Sbjct: 294 SHSSQSFALVGTIIVLPVILVYNAMQYRVFRGKVRE 329