Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome d ubiquinol oxidase, subunit II (RefSeq) from Shewanella sp. ANA-3

 Score =  121 bits (304), Expect = 2e-32
 Identities = 101/364 (27%), Positives = 163/364 (44%), Gaps = 58/364 (15%)

Query: 3   QYLPEIYLLLLGFTVFMYAVLDGYDLGVGILLP--RNDVAQRDRMIASIGPFWDANETWL 60
           + L  I+  L+G     +AV DG+D+GVG LLP    D  +R  M+ +I P WD N+ WL
Sbjct: 5   EILRVIWWALIGVLFIGFAVTDGFDMGVGALLPIIGKDDTERRIMVNTIAPHWDGNQVWL 64

Query: 61  VLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAK-ADHKDHWDLCFK 119
           + A G L  A+P  +++ F+  Y+   L+L AL  R V FD+R+K +    +  WD    
Sbjct: 65  ITAGGALFAAWPMVYAVSFSGFYVAMMLVLFALYTRPVGFDYRSKIENPKWRKSWDWALF 124

Query: 120 IGSLLAALTQGYMIGRYVVG----FESAPEA----------YAFAVLSALCVAAAYVYIG 165
            G  +  L  G   G  + G    F+    A            F +L+ L   + ++  G
Sbjct: 125 CGGFIPPLIIGVAFGNLLQGVPFNFDEFLRATYHGGLFGLLNPFGLLAGLVSVSMFMMQG 184

Query: 166 GAWLVLKTEGELQVRAARWSRKAGWL-----AALGVLSV---------------SLVNPW 205
            AWL +KT+GEL+VRAA  ++    L     AA GV                  +L NP 
Sbjct: 185 AAWLQMKTDGELRVRAANATQLCALLVAVLFAAAGVWLANGIDGYVITSTLDHHALSNPT 244

Query: 206 VNSAVAE--RWFS----FPEVILLAPVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGV 259
           + +   E   W +    +P  +L   + + +   +++V R       +N +G  + F  +
Sbjct: 245 LKTVAVESGAWLANYDKYPITMLFPVLGVALPLLVILVSR-------LNRSGFAFLFSSL 297

Query: 260 VLIFGLSFLGLAYSFFPEIVPG------IMTAQQAASSPETLMVVGIGVVIVMPTILLYT 313
            +   +   G A   FP ++P        +T   A +S  TL V+    +I +P +L YT
Sbjct: 298 TVAMVILTCGAA--MFPFVMPSSLDPNVSLTMWDATASEMTLTVMTWAAIIFVPIVLSYT 355

Query: 314 FFVY 317
            + Y
Sbjct: 356 VWTY 359