Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  261 bits (667), Expect = 8e-75
 Identities = 133/222 (59%), Positives = 170/222 (76%), Gaps = 1/222 (0%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           ++ LQ + K +  G   V+AL GVD+ IR  EF+AI+GPSGSGKSTLMN++GCLD+PT+G
Sbjct: 1   MISLQALTKSFRMGDAEVQALRGVDIHIRQNEFVAIMGPSGSGKSTLMNIIGCLDRPTSG 60

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
            Y L+G  V  LS   L+A+RN++IGFVFQSF+LL   SALDNV LPL ++     DR+ 
Sbjct: 61  NYLLNGSAVGGLSDDALSAVRNREIGFVFQSFHLLPRLSALDNVLLPLRFSETPRGDRQH 120

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
            A ELL RVGL  RLDH+PNQLSGGQ+QRVAIARAL+N+P +LLADEPTGALDSK+  EI
Sbjct: 121 -AIELLERVGLGQRLDHRPNQLSGGQRQRVAIARALVNRPTLLLADEPTGALDSKTSVEI 179

Query: 189 EALFNELHREGRTIIVVTHDNELAKRTKRIVTIRDGQVVSDE 230
            ALF+ELH  G+TI++VTH+ E+A+   RI+ +RDG V  D+
Sbjct: 180 MALFDELHLSGQTIVLVTHEEEVAECAGRIIRMRDGVVQQDK 221