Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., lipoprotein releasing system ATP-binding protein LolD (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (531), Expect = 5e-59
 Identities = 111/221 (50%), Positives = 155/221 (70%), Gaps = 1/221 (0%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           L++++ + K Y  G+   + L GVDL++  GE LAI+G SGSGKSTL++++G LDKPT+G
Sbjct: 5   LLKVENVSKTYREGKLETQVLCGVDLSVYRGEQLAIVGGSGSGKSTLLHIMGSLDKPTSG 64

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
           +  L+G  + SLS  + A IRN  +GF++Q  +LL   SAL+NVA+P   AGV  K    
Sbjct: 65  KVLLEGEDLYSLSAARQAQIRNASLGFIYQFHHLLPEFSALENVAMPARIAGVDKKTAFG 124

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
           RA  LL RVGL+ RL H P++LSGG++QRVAIARALINQP+++LADEPTG LD+ SG  +
Sbjct: 125 RAEALLERVGLSHRLSHAPSELSGGERQRVAIARALINQPRLVLADEPTGNLDAASGEAV 184

Query: 189 EALFNELHRE-GRTIIVVTHDNELAKRTKRIVTIRDGQVVS 228
            AL  EL  + G   +VVTHDN LA R  R ++++ G++ +
Sbjct: 185 YALIRELAAQLGTAFVVVTHDNALAARMDRQLSMKSGKLTT 225