Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  195 bits (496), Expect = 6e-55
 Identities = 102/219 (46%), Positives = 150/219 (68%), Gaps = 1/219 (0%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           L+++  + K Y  G    + L GV+L+I  GE +AI+G SGSGKSTL++++G LDKP++G
Sbjct: 9   LLQVSNVSKRYHEGSIDTQVLSGVNLSIAKGEQVAIIGSSGSGKSTLLHIMGTLDKPSSG 68

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
           +   DG  +  LS  + AAIRNQ++GF++Q  +LL   +AL+NVA+P +      ++  +
Sbjct: 69  QVMFDGEDLYQLSPSRQAAIRNQELGFIYQFHHLLPEFTALENVAMPGLIQKRPRQEVEQ 128

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
            A ELL+RVGL  RL H P ++SGG++QR AIARALIN+P+++LADEPTG LD+ SG  +
Sbjct: 129 EAKELLSRVGLGHRLHHTPAEMSGGERQRTAIARALINRPKLVLADEPTGNLDAASGDSV 188

Query: 189 EALFNELHRE-GRTIIVVTHDNELAKRTKRIVTIRDGQV 226
             L  EL  + G   +VVTHD +LA R  R + ++DGQ+
Sbjct: 189 YELIRELGSQLGTAFVVVTHDPKLAARMDRQLKMQDGQL 227