Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  205 bits (522), Expect = 6e-58
 Identities = 106/218 (48%), Positives = 147/218 (67%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           ++ ++ I K + +      AL   +L ++ GEF+A+ GPSGSGK+T +N+ G L+  T G
Sbjct: 1   MLTMKNINKVFKTDLVETHALRDFNLEVKEGEFVAVTGPSGSGKTTFLNIAGLLEGFTNG 60

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
            Y LD   + +LS  + AAIRN+KIGF+FQ FNL+   +  +NV +PL Y G  AK+R+R
Sbjct: 61  EYHLDDVNISNLSDNKAAAIRNEKIGFIFQGFNLIPDLNLAENVEVPLRYRGFNAKERQR 120

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
           R    L +VGL  R+ H P+QLSGGQ+QRVAIARAL  +P+ LLADEPTG LDS    ++
Sbjct: 121 RVKAALEQVGLGARMKHLPSQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQV 180

Query: 189 EALFNELHREGRTIIVVTHDNELAKRTKRIVTIRDGQV 226
             L  E+++ G TII+VTHD ELA+R +R + I DGQV
Sbjct: 181 MELLEEINKAGTTIIMVTHDPELARRAQRNIQIVDGQV 218