Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (502), Expect = 1e-55
 Identities = 106/215 (49%), Positives = 150/215 (69%), Gaps = 3/215 (1%)

Query: 17  KHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAGRYQLDGHP 76
           K  T+ +  +  L G++L ++ GE +AILGPSGSGKSTL+ +L  LD PTAG   LDG  
Sbjct: 18  KSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTAGEIWLDGEA 77

Query: 77  VDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRRRATELLTR 136
           +  L+ +Q AA+R QK+ F+FQSF L++  +AL+NV LP   AGV  K+ + +A  +L R
Sbjct: 78  LSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGV--KNAKEKAEAMLGR 135

Query: 137 VGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEIEALFNELH 196
           VGL+ RL H P QLSGG++QRVAIARA I +P++L ADEPTG LDS +G +I  +  EL+
Sbjct: 136 VGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDSVNGHKIADMLFELN 195

Query: 197 REGR-TIIVVTHDNELAKRTKRIVTIRDGQVVSDE 230
           +E   T+I+VTHD +LAKR +R + + +G +  +E
Sbjct: 196 QENHTTLILVTHDLQLAKRCQRQLVMDNGHLQENE 230