Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., lipoprotein releasing system ATP-binding protein LolD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  189 bits (480), Expect = 4e-53
 Identities = 102/217 (47%), Positives = 145/217 (66%), Gaps = 1/217 (0%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           L+++Q + K Y  G    + L  VDL +  GE LAI+G SGSGKSTL++++G LDKP++G
Sbjct: 5   LLQVQAVSKSYHDGDVTTQVLSDVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSSG 64

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
           +  L G  +  +S+ + A IRNQ +GF++Q  +LL   +AL+NVA+P    G      + 
Sbjct: 65  KVLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFTALENVAMPAFIQGRDRTLAQA 124

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
            A  LL RVGL  R+ H P +LSGG++QRVAIARALIN+P+++LADEPTG LD+KSG  +
Sbjct: 125 DAKVLLERVGLGHRMSHIPAELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAV 184

Query: 189 EALFNELHRE-GRTIIVVTHDNELAKRTKRIVTIRDG 224
             L  EL  + G   +VVTHD +LA R  R +T+++G
Sbjct: 185 YELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNG 221