Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  245 bits (625), Expect = 2e-69
 Identities = 118/224 (52%), Positives = 161/224 (71%)

Query: 8   PLVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTA 67
           PL+E+    + + +G+  +  L  ++L+I  GE +AI+G SGSGKSTLMN+LGCLDKP+ 
Sbjct: 4   PLLEVSACYRSFQAGEQQLTVLKDINLSIARGEMVAIVGASGSGKSTLMNILGCLDKPSK 63

Query: 68  GRYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRR 127
           G Y +DG     +   +LA +R +  GF+FQ ++LL   +A+ NV +P VYAG    +RR
Sbjct: 64  GAYFIDGQDTSQMDVDELAKLRREHFGFIFQRYHLLGDLNAVGNVEVPAVYAGKDRLERR 123

Query: 128 RRATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAE 187
            RA  LL+R+GL +RLDHKPNQLSGGQ+QRV++ARAL+N   ++LADEPTGALDS SG E
Sbjct: 124 DRAESLLSRLGLGERLDHKPNQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHSGEE 183

Query: 188 IEALFNELHREGRTIIVVTHDNELAKRTKRIVTIRDGQVVSDEP 231
           +  L  ELHREG TII+VTHD  +A+   RI+ I+DG ++SDEP
Sbjct: 184 MMRLLQELHREGHTIIIVTHDMHVAQHADRIIEIKDGVIISDEP 227