Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., lipoprotein releasing system ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  205 bits (522), Expect = 5e-58
 Identities = 105/222 (47%), Positives = 152/222 (68%), Gaps = 5/222 (2%)

Query: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68
           +++L+ I K + S    ++ L G+DL I  GE ++I+GPSG+GK+TL+ ++G LD+P AG
Sbjct: 1   MIKLEGITKSFGS----LQVLKGIDLEINKGEIVSIVGPSGAGKTTLLQIMGTLDEPDAG 56

Query: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128
              +DG  V  +  ++L+A RN+ IGFVFQ   LL   +AL+NV +P   AGV +K+   
Sbjct: 57  TVAIDGTVVSRMKEKELSAFRNKNIGFVFQFHQLLPEFTALENVMIPAFIAGVSSKEANE 116

Query: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188
           RA E+L  +GL DR  HKPN+LSGG+KQRVA+ARALIN P ++LADEP+G+LD+ +  ++
Sbjct: 117 RAMEILAFMGLTDRASHKPNELSGGEKQRVAVARALINHPAVILADEPSGSLDTHNKEDL 176

Query: 189 EALFNELH-REGRTIIVVTHDNELAKRTKRIVTIRDGQVVSD 229
             LF +L  R G+T ++VTHD  LAK T R V + DG +  D
Sbjct: 177 HQLFFDLRDRLGQTFVIVTHDEGLAKITDRTVHMVDGTIKKD 218