Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., Lipoprotein releasing system transmembrane protein LolC from Pseudomonas fluorescens FW300-N2E2

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 86/382 (22%), Positives = 150/382 (39%), Gaps = 55/382 (14%)

Query: 69  HGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMM----------P 118
           H     G+A+S     +  +   P V    P  + Q L+T   K S ++           
Sbjct: 25  HATLESGEAISDWPSLAAKVKQNPQVLAVAPFTQMQGLLTNDGKVSKVLLNGIDPGLERQ 84

Query: 119 YAVKSEYQAMNKLR-LLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELE 177
            ++   +    KL  L PG       D+   +  V +G +L            F   E+ 
Sbjct: 85  VSIIDNFMQQGKLDDLAPGSFGIVIGDKAAAKLGVAIGDKLT-----------FVAPEVT 133

Query: 178 QDPVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFH---PNQAISGI 234
             P G   ++    FTV+G+    +G ++      Y G T      R H   P+Q + G+
Sbjct: 134 VTPGGMFPRM--KRFTVVGIFHVGAGELD-----GYLGVTNLQDLARLHRWKPDQ-VQGL 185

Query: 235 NLEPRVGSDRQALAATVQQVL--KRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFL 292
            L+         +A T+ Q L   R YA           +D   +  ++ Q +   ++ +
Sbjct: 186 RLKFDDLFQAPRVAWTIAQQLGEDRYYA-----------RDWTRTHGNLYQAIRMEKAMI 234

Query: 293 GIIGFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGI 352
           G++  + +AVA+  I + +   V     DI +   +GATP  I   ++ Q  +   +G  
Sbjct: 235 GLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPGQIMRIFMVQGTVIGVIGTF 294

Query: 353 AGLGV-TFAMVRLLAAI-PLQGNPIYDHLGQPV-------PELSLSVIVIVIVTITVMGI 403
            G  V  FA + + AAI  L+G   +  L   V        +L +  +++V     V+  
Sbjct: 295 VGALVGMFAALNVSAAIAALEGLIGHKFLNADVYFIDYLPSQLQVDDVLMVCGAALVLSF 354

Query: 404 VAAWLPANHAAKVTPLQALQSE 425
           +A   PA  AA+  P +AL+ E
Sbjct: 355 LATLYPAWRAARTQPAEALRYE 376