Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., Pyoverdine efflux carrier and ATP binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  111 bits (277), Expect = 8e-29
 Identities = 106/420 (25%), Positives = 179/420 (42%), Gaps = 44/420 (10%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           M   + R +LT+L +      +  +LAVGEG +  ++  +     N+I+++G   +    
Sbjct: 276 MWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLNGSAPSP--- 332

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
           R  +G    ++E D   LAALP V+  +P       + F +           + +  +  
Sbjct: 333 RAAKG---IISEYDLAALAALPEVQRIMPVNGADASVRFGNLDHTSYVGGNDTNFPIIFN 389

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
             +  G  +F+  DE     V V+GY++  +LF               DPVG+   I   
Sbjct: 390 WPVAQGS-YFSEADERSAAAVAVIGYRVRQKLFKDVA-----------DPVGRYILIENM 437

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFST-----WQRFHPNQAISGINLEPRVGSDRQ 245
            F V+GVLA+  G     S  D     P+S      +   HP   +       +V    Q
Sbjct: 438 PFQVVGVLAEK-GASSGDSDADDRVAVPYSAASVRLFGSRHPEYVVIAAKDAGKVKEAEQ 496

Query: 246 ALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASL 305
           A++ T+ ++   K    L +    M+Q    +Q +       L   LG I  I+L V  +
Sbjct: 497 AVSRTLLRLHDGKKDFELTNNA-AMIQAEARTQGT-------LSLMLGAIAAISLLVGGI 548

Query: 306 GITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLL 365
           G+ N+M  TV+  TR+IG+RMA GA    I   +L ++++   +GG+AG+G+   +   L
Sbjct: 549 GVMNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIGLALLVGGAL 608

Query: 366 AAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQSE 425
                        LG+         +        V G+V  ++PA  AA++ P+ AL SE
Sbjct: 609 L------------LGKIAVAFEWLAVFGAFGCALVTGVVFGFMPARKAARLDPVAALTSE 656