Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., macrolide transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  106 bits (265), Expect = 2e-27
 Identities = 92/418 (22%), Positives = 184/418 (44%), Gaps = 43/418 (10%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           + + ++R  LT+L +      +  ++A+GEG++  +++ IQ    N I +  G      G
Sbjct: 270 LVSHRMRTLLTMLGIIIGITSVVSIVAIGEGVKQYVLKDIQAIGSNTIEIMPG---SDWG 326

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
                   +L   D   L     +  A P+     L+ + +         V + Y  +  
Sbjct: 327 DSRSTAIETLVLSDVTALGDQYYIDSATPNLGRNLLLRYENIDVNATVNGVSASYFQVRG 386

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
           +++   G  F+  D  +Q +VVV+ +  + +LF               DP+G++  +   
Sbjct: 387 IKI-GSGVAFSKDDARRQSQVVVIDHNTSHRLFGSHT-----------DPLGKVILVDNL 434

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALAA 249
             TVIGV             ++   + P+ T   R    + +  I +  + G   + +  
Sbjct: 435 PCTVIGVTEDRKSVFNTSKNLNI--WMPYETAAGRLLGQRFLDSITVRIKDGQPSKLVED 492

Query: 250 TVQQVLKRKYAASLQDQQIVMVQDHFLSQ-----KSMQQFLLRLQSFLGIIGFITLAVAS 304
            V ++L +++           ++D F        +++Q+    L   L +I  I+L V  
Sbjct: 493 NVVKLLTQRHG----------IKDFFTYNLDSVMQTVQKTSQSLALLLSLIAIISLVVGG 542

Query: 305 LGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRL 364
           +G+ N+M  +V   TR+IG+RMAVGA  + IR  +L ++++   MGG  G+ ++F +  +
Sbjct: 543 IGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLMGGTIGIALSFGIGYV 602

Query: 365 LAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQAL 422
            +    +   ++          S+  IV  +V  T++GIV  ++PA +AA++ P+ AL
Sbjct: 603 FSIFVKEWQMVF----------SVGSIVTAVVCSTLIGIVFGFVPARNAARLDPINAL 650