Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  118 bits (296), Expect = 5e-31
 Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 43/418 (10%)

Query: 11  MAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHG 70
           + + ++R  LT+L +      +  ++A+GEG +  +++ IQ    N I V  G      G
Sbjct: 270 LISHRMRTLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIQAIGSNTIEVFPG---SDFG 326

Query: 71  RFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNK 130
                   +L   D   L++   +  A P+     L+ + +         V   Y  +  
Sbjct: 327 DTKSMDIQTLALSDVAALSSEYYIDSATPNIGRNLLVRYRNIDVSATVSGVSPSYFQVRG 386

Query: 131 LRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAH 190
            ++   G  FN  D  +Q +VVV+ +   ++LF  +            DP+GQ+  +G  
Sbjct: 387 TKM-GLGVGFNKDDARRQAQVVVIDHNTRIRLFGPKV-----------DPLGQVILVGNL 434

Query: 191 EFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGSDRQALAA 249
             TVIGV  +N  NI   S  + + + P+ T   R      + GI +  + G   + +  
Sbjct: 435 PCTVIGV-TENKKNIFDTSK-NLNIWMPYETASGRLLGQTYLDGITVRVKDGQPSKVVED 492

Query: 250 TVQQVLKRKYAASLQDQQIVMVQDHFLSQ-----KSMQQFLLRLQSFLGIIGFITLAVAS 304
            V ++L++++            +D F        +++Q+    L   L +I  I+LAV  
Sbjct: 493 NVNKLLQKRHGT----------KDFFTYNLDSVMQTVQKTSQSLALLLSLIAVISLAVGG 542

Query: 305 LGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRL 364
           +G+ N+M  +V   TR+IG+RMAVGA  + IR  +L ++++   +GG+ G+ ++F +  +
Sbjct: 543 IGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLIGGVIGISLSFVIGYV 602

Query: 365 LAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQAL 422
            + +  +   ++          SL  IV   +  T++GIV  ++PA +AA++ P++AL
Sbjct: 603 FSLLVKEWQMVF----------SLGSIVTAFICSTLIGIVFGFVPARNAAQLDPIEAL 650