Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (289), Expect = 3e-30
 Identities = 105/430 (24%), Positives = 194/430 (45%), Gaps = 50/430 (11%)

Query: 4   IRQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGG 63
           IR   + M   + R +LT+L +      +  +LAVGEG +  ++  + +   N+I+++G 
Sbjct: 270 IRAAWRVMWINRFRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYLNG- 328

Query: 64  YATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKS 123
                + R  +G    +T ++   L  LP VK  +P    Q  + + +           +
Sbjct: 329 --KAPNPRAPKGV---ITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGGNDT 383

Query: 124 EYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQ 183
            + A+    ++ G  +F+  DE     V V+GY++  +LF +Q            DPVGQ
Sbjct: 384 HFPAIFNWPVVEGS-YFSEADEQNAAAVAVIGYKVRQKLFGEQS-----------DPVGQ 431

Query: 184 IAKIGAHEFTVIGVLAKN---SGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPR 239
              I    F V+GVL +    SG+++  + I      P+S+   R    Q    I +  R
Sbjct: 432 YILIENVPFQVVGVLQEKGATSGDLDSDNRIAI----PYSSASIRLFGTQDPEYITIATR 487

Query: 240 VGSDRQALAATVQQVLKRKYAASLQDQQIV----MVQDHFLSQKSMQQFLLRLQSFLGII 295
             ++ +    +++ +L++ +    QD ++     M+Q    +Q +       L   LG I
Sbjct: 488 DANNVKQAEQSIRNLLQQLHHGK-QDYELTNNAAMIQAEARTQNT-------LSLMLGSI 539

Query: 296 GFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGL 355
             I+L V  +G+ N+M  TV+  TR+IG+RMA GA  + I   +L ++++   +GG+AG+
Sbjct: 540 AAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGI 599

Query: 356 GVTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAK 415
            +   M   L             L +     +L  +        + G++  ++PA  AA+
Sbjct: 600 VLALGMGAALL------------LSKVAVAFTLPAVAGAFACALITGVIFGFMPARKAAR 647

Query: 416 VTPLQALQSE 425
           + P+ AL SE
Sbjct: 648 LDPVAALTSE 657