Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., transmembrane ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 100/434 (23%), Positives = 175/434 (40%), Gaps = 55/434 (12%)

Query: 4   IRQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGG 63
           ++  ++ + A   R  LT+L +      +  +LA+G G ++ ++  I +   +L+ V   
Sbjct: 257 VKMALRALRANLFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSDLLVVRPS 316

Query: 64  YATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKS 123
            A         G  ++L   D+  +  L  V  A+P     E+ +    R   + Y   +
Sbjct: 317 MANFRGSA--GGTNVTLVPADADAITELANVAFAVP-----EMTSTVTLRRGNIDYQTTA 369

Query: 124 EYQAMN----KLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQD 179
                     K   +  G + N  D      V VLG  +   LF   EG          D
Sbjct: 370 NGTVPQFTEAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTLF--PEGS---------D 418

Query: 180 PVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEP 238
           P+GQ   +    F VIGV++   G    G+  D     P +T   R    + I  I ++ 
Sbjct: 419 PIGQYVLVNKIPFQVIGVMS-GMGASAGGNDQDDVVLVPLTTGSMRLFGQRNIRTITVKV 477

Query: 239 RVGSDRQALAATVQQVLKRKYAASLQDQQIV---MVQDHFLSQKSMQQFLLRLQSFLGII 295
           +  S        +Q +L  ++     D QI     V++ F    +  +F      FLG +
Sbjct: 478 QDASAIDLTQERIQALLNERHRKD--DTQITNMSSVREAFTETSNTMKF------FLGSV 529

Query: 296 GFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGG---- 351
             I+L V  +G+ N+M  +V   TR+IGVRMA GA    I   ++ ++L+   +GG    
Sbjct: 530 AAISLLVGGIGVMNIMLVSVSERTREIGVRMATGARERDILVQFIVEALVVSAIGGAIGV 589

Query: 352 IAGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPAN 411
           +AGL   +A                   G PV   +   + +      + G++  +LPA 
Sbjct: 590 VAGLSTGYAA---------------KAFGMPV-SFTPGPVALAFACAFLTGLLFGYLPAR 633

Query: 412 HAAKVTPLQALQSE 425
           +A+++ P  AL ++
Sbjct: 634 NASRLQPAVALSAD 647