Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 86/385 (22%), Positives = 161/385 (41%), Gaps = 75/385 (19%)

Query: 72  FHEGQALSL---TEQDSQVLAALPMVKHALP-------SAEWQELITFAD----KRSWMM 117
           F+ G+ + L    E+D ++L  LP +K A P        + W +   F D    K +  +
Sbjct: 63  FNFGEEMDLFARDERDLEILRNLPGIKSAAPINMVPLSGSGWSD--RFVDGPDPKNAKSL 120

Query: 118 P----YAVKSEYQAMNKLRLLPG-----GRWFNPVDETQQRKVVVLGYQLAVQLFNQQEG 168
           P    Y    E      LRL+ G     G+  +  ++   ++  +L   LA   +     
Sbjct: 121 PQFAFYLSDEELVNALGLRLVEGRTFHKGQVLSGFEDKSIQREAILSQPLAKAFWG---- 176

Query: 169 DWFSGGELEQDPVGQIAKIGAHE-FTVIGVLAKNSGNIEQGSPIDYSGFTPFSTW--QRF 225
                   E+ P+G++   G  E  TV+GV+ +  G                  W   R 
Sbjct: 177 --------EESPIGKVVYQGDDEPITVVGVVERLHG-----------------AWVDDRN 211

Query: 226 HPNQAISGINLE---PRVGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQ 282
             N  I  I+     P  G   ++ AA + Q+ +   AA L+D+   +++      ++ +
Sbjct: 212 LENSVIMNIDFNGRSPNAGYMIRSEAADIPQLKETIKAALLKDEPRRVIRGFSTIAENRE 271

Query: 283 QFLLRLQSFLGIIG---FITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHY 339
           Q        + ++     + L + +LG++ ++   ++R TR IG R A+GAT   I   +
Sbjct: 272 QNYASHAMMVFVLSCMIILLLVITALGLSGMVMFNIERRTRQIGTRRALGATRGNILGWF 331

Query: 340 LAQSLITMGMGGIAGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTIT 399
           L ++ + +G+G + G  + F + R      L      D L    P ++++ ++ V+ TI 
Sbjct: 332 LTENYLLLGVGALVGSLLAFELSR-----QLMDFFSLDALAWQYPAVTVA-LLFVVTTIA 385

Query: 400 VMGIVAAWLPANHAAKVTPLQALQS 424
           V+      +PA  AA ++P  A +S
Sbjct: 386 VI------IPARRAAAISPSIATRS 404