Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 90/421 (21%), Positives = 177/421 (42%), Gaps = 30/421 (7%)

Query: 8   MQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQ 67
           ++E+    +R  LT+L +      +  ++ +G G    +   I +   NL+ +  G    
Sbjct: 10  LREIRRNLMRSFLTVLGIVIGVAAVITMVTLGNGATRMVAEQISSLGSNLLILRPGQRLG 69

Query: 68  THGRFHEGQALSLTEQDSQVLAALPMVKHALPS-AEWQELITFADKRSWMMPYAVKSEYQ 126
             GR   G           +L  +P +K   P  +    L+  A+  S  +  +  + + 
Sbjct: 70  P-GRDSAGAPNFRAADVEALLTQVPSLKAVAPVVSSTVTLVAGAENWSSSVTGSTNAYFV 128

Query: 127 AMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAK 186
           A N    L  GR F+  +    + V V+G  +  +LF              Q P+G   +
Sbjct: 129 AGNWK--LAAGRQFSDEEMRAGKAVCVIGNTVKQKLF------------AGQSPLGNAVR 174

Query: 187 IGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQR--FHPNQAISGINLEPRVGSDR 244
           +      ++G+LA + G    G   D     P  T QR      Q +S + L  + G+  
Sbjct: 175 VKNFSCEIVGILA-SKGQGAMGMDQDDVVLMPLVTAQRRLTGKTQDVSTLMLSLKDGASS 233

Query: 245 QALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVAS 304
             +   ++Q+++ +   +  D     + D     +++   +  + + LG +  ++L V  
Sbjct: 234 PRVMEQIRQLMRERRKLAENDDDNFNLMDTKQIAEALSGTIGTMTTLLGAVAAVSLLVGG 293

Query: 305 LGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRL 364
           +GI N+M  +V   TR+IG+R+A+GA  N +   +L +++     GG+  +G+  A++  
Sbjct: 294 IGIMNIMLVSVTERTREIGIRLAIGALENEVLLQFLIEAVALSAFGGL--VGIILALLAC 351

Query: 365 LAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQS 424
           L    L G P   + G  +     S  +         G++  ++PA  AA + P++AL+ 
Sbjct: 352 LGLSALMGMPFLFNPGINLLAFGFSAAI---------GVIFGYVPARRAAGLDPIEALRH 402

Query: 425 E 425
           E
Sbjct: 403 E 403