Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 93/428 (21%), Positives = 177/428 (41%), Gaps = 43/428 (10%)

Query: 13  AEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHGRF 72
           + KLR  +TIL +      +  +++ G+ + + +   + +   + I ++   A  +    
Sbjct: 16  SSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAAQGSD--- 72

Query: 73  HEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNKLR 132
            + +   LT+ D  +L  +  +++       +  + FA  R       V     +     
Sbjct: 73  -DDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVWSQMTDE 131

Query: 133 LLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAHEF 192
            L  GR     D       V++ Y  A + F+++ G            + Q+  IG  +F
Sbjct: 132 ELSAGRLLQASDSN----AVIISYYTATEAFDREIG------------INQMITIGNKQF 175

Query: 193 TVIGVLAKNS--GNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRVGSDRQALAAT 250
            V+G+L ++   G  + G     + + P+        +   S    E   G   + +   
Sbjct: 176 KVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTL 235

Query: 251 VQQVLKRKYAASLQDQQIVMVQDHFLSQKSM-------------QQFLLRLQSFLGIIGF 297
            + V       +L++ Q  ++    +++ +M             +Q +  L +FL  I  
Sbjct: 236 YEDV---NQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAG 292

Query: 298 ITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGV 357
           I+L V   GI+N MF TV   TR+IG+  A+GA    I   ++  S I   +GG  GL +
Sbjct: 293 ISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVL 352

Query: 358 TFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVT 417
              + +++     Q     D   Q V  LS+  +VI I      GI+A  +PA +A+K+ 
Sbjct: 353 GTILSQIIVWFIAQS---MDSSYQFV--LSIKSVVIAIGCSLAAGIIAGIIPAYNASKLK 407

Query: 418 PLQALQSE 425
           P++AL+SE
Sbjct: 408 PVEALRSE 415