Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 100/419 (23%), Positives = 176/419 (42%), Gaps = 37/419 (8%)

Query: 15  KLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQTHGRFHE 74
           KLR  +TI+ V  +   +  +++ GE +   +   ++   G++I V     T+T  +  E
Sbjct: 18  KLRSWITIIGVVVAVASVITIISAGELMEKQVTHELEKLGGDVISVYA-ITTETSSKTPE 76

Query: 75  GQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAMNKLRLL 134
                LT+ D  V+  +P VK+          I++ DK  +     V            +
Sbjct: 77  -----LTKTDVLVIKGIPSVKYVDKRVTSYSKISYGDKELYSQITGVDPAVWPKITQEKV 131

Query: 135 PGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQIAKIGAHEFTV 194
             GR   P D    + VVV+   LA + FN++              + QI KIG   F V
Sbjct: 132 ETGRMLQPGD----KNVVVINNYLANEEFNRKIN------------INQIIKIGNKSFRV 175

Query: 195 IGVLAKNSGNIEQ------GSPID-YSGFTPFSTWQRFHPNQAISGINLEPRVGSDRQAL 247
           IG+L  +S  +         +P+D        S +           + ++ +   D  A 
Sbjct: 176 IGILDNDSSGLASLFSGGIYAPLDSVYDIEQDSDYSVPKERGTYDSLEIKLKENVDTDAA 235

Query: 248 AATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLAVASLGI 307
              ++Q L+     + ++Q   +       + S Q  +  +  FL  I  I+L V + GI
Sbjct: 236 VQDIEQKLRTSRHVTEKNQDFYISSAKSFIESS-QSIIGGITLFLSFIAGISLIVGAFGI 294

Query: 308 TNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAMVRLLAA 367
           +N MF  V   T++IG+  A+GA    I   +L  S +    GG  GL +   + +++  
Sbjct: 295 SNTMFTAVLEKTKEIGIMKAIGAKNEDILLLFLFNSGLIGLAGGFLGLLIGVLITQVITY 354

Query: 368 IPLQGNPIYDHLGQPVP-ELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQALQSE 425
           +      I    G P    +S+  +V+ +V     GI+A  +PA +A+K+ P+ AL+SE
Sbjct: 355 V------IALKFGTPFEFYVSIKSVVVALVVSIGAGILAGAVPAYNASKLKPVDALRSE 407