Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score = 73.9 bits (180), Expect = 8e-18
 Identities = 101/436 (23%), Positives = 181/436 (41%), Gaps = 69/436 (15%)

Query: 9   QEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGNGNLIHVSGGYATQT 68
           + +  +K +  LTI+ V    L I  L+++G G+++ I   I     N+I +     +Q 
Sbjct: 12  RNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITGEITTIGANVISI---LPSQN 68

Query: 69  HGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKSEYQAM 128
            G    G A+S    D+ V         A+ +    E +  A   S+ + Y  ++ Y   
Sbjct: 69  FG----GPAVSKNFNDNDV--------SAVRNVRGVEEVVAAWFGSYGLEYRDQTHYG-- 114

Query: 129 NKLRLLPG----------------GRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFS 172
           N L + P                 GRW     E   +   ++GY LA   F+++      
Sbjct: 115 NVLVIEPSKFTHVYSKTWGYEPYKGRWI----EDNDKYSCMIGYALATNSFDREID---- 166

Query: 173 GGELEQDPVGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAIS 232
                   +G    I   ++ VIG+L +      + S I     +     + F  N   +
Sbjct: 167 --------IGDKITINDKKYKVIGILEETGNPRTEDSVI----LSKDVGEELFEINDEYN 214

Query: 233 GINLEPRVGSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFL 292
            + +  R G D   ++  ++  L+     S  D+   ++    L++     F +     +
Sbjct: 215 MMIVSVRSGEDVNKVSEDIEDELED----SRGDENFSVLTAEQLAESINSIFEVLTIFLV 270

Query: 293 GIIGFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGI 352
           G+ G I+L V ++GI+N M  ++    +DIG+  A+GA  NTI   ++ ++      GGI
Sbjct: 271 GVAG-ISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGI 329

Query: 353 AG--LGVTFA-MVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLP 409
            G  LG+  A  +  +AAI           G     +S  +IV V+V   V+GI++ + P
Sbjct: 330 IGTILGILIAKAIEYIAAI--------SGYGLIRAWISWELIVGVLVFSFVVGILSGYFP 381

Query: 410 ANHAAKVTPLQALQSE 425
           A   AK+ P+  L+ E
Sbjct: 382 ARSGAKLNPVDTLRGE 397