Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., macrolide ABC transporter permease/ATP-binding protein MacB from Klebsiella michiganensis M5al

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 98/424 (23%), Positives = 182/424 (42%), Gaps = 36/424 (8%)

Query: 4   IRQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQN-GNGNL-IHVS 61
           +R   + +   ++R  L++L +      +   +AVGEG R  I+  I   GN  L I   
Sbjct: 258 VRMAWRSLLGHRMRAFLSMLGIIIGISSVVSSMAVGEGARQSIMNEIGKLGNTTLEIRPG 317

Query: 62  GGYATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAV 121
            G+ ++   R    +ALSL   D   L   P V+   P              S ++   V
Sbjct: 318 TGWGSK---RPDMERALSL--DDIASLGRQPWVQGVSPIVSSMTTAVRQGFDSSIILSGV 372

Query: 122 KSEYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPV 181
            +EY ++  +R + G   F   D   +  V+VL       LF   E           DP+
Sbjct: 373 SAEYFSLQGMRFIQGNG-FTHRDVEDREPVLVLDETSRETLFPGNE-----------DPL 420

Query: 182 GQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRVG 241
           G+I +I    + VIG+ +K    +  G    +  +T  S  QR   ++ +  + L  +  
Sbjct: 421 GKIVQIAGAPWRVIGIASKPGPKVVSGFMSAWIPYT--SLLQRISGDKPLEALTLRFQET 478

Query: 242 SDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITLA 301
              Q  A   ++ L R++      ++   VQ      K++Q+    +   +  I  I+L 
Sbjct: 479 LSPQDAARRAERHLIREHG-----KKDFFVQTDEQLAKALQKTSDSMSLLITAIAAISLL 533

Query: 302 VASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGLGVTFAM 361
           V  +G+ N+M  +V   T +IG+R++VGA P+ I   +L ++++   +GG+ G+  ++A 
Sbjct: 534 VGGVGVMNIMLVSVTERTHEIGIRLSVGARPSDIMHQFLIEAVMICALGGLTGVLGSWAA 593

Query: 362 VRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTPLQA 421
             L A +  + + ++  L           + +      ++G+   + PA  AA++ P +A
Sbjct: 594 GNLFALLTQEFSMVFTWL----------PVAMACGFSALIGLTFGYFPARRAARLNPTEA 643

Query: 422 LQSE 425
           L  E
Sbjct: 644 LARE 647