Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., lipoprotein releasing system, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 294 IIGFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLIT----MGM 349
           I+  I L V S  I   +   V   TRDI + M++GAT + +R  ++ Q  I       +
Sbjct: 280 ILALIVL-VGSFSIVTTLVMLVMEKTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTAL 338

Query: 350 GGIAGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLP 409
           G + GL V++A+ R       QG    DHL  PV  L  S +  V     ++  +A   P
Sbjct: 339 GYVLGLSVSWALQRYQFIKLPQGVYSIDHL--PV-LLQWSDLAAVGGAAMLLCFLATIYP 395

Query: 410 ANHAAKVTPLQALQSE 425
           A  AA + P++AL+ E
Sbjct: 396 ARQAAALEPVEALRYE 411