Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., MacB family efflux pump subunit from Cupriavidus basilensis FW507-4G11

 Score =  102 bits (254), Expect = 4e-26
 Identities = 104/429 (24%), Positives = 171/429 (39%), Gaps = 49/429 (11%)

Query: 5   RQIMQEMAAEKLRLSLTILAVAWSTLCIAGLLAVGEGIRSGIVRTIQNGN-GNLIHVSGG 63
           R   + M   ++R  LT+L +      +  +LAVGEG R  ++   Q G  G  I   G 
Sbjct: 294 RTAWRGMRLNRVRTGLTLLGIIIGVASVIVMLAVGEGARQRVMA--QMGTLGTTIMYLGS 351

Query: 64  YATQTHGRFHEGQALSLTEQDSQVLAALPMVKHALPSAEWQELITFADKRSWMMPYAVKS 123
               T G      A  LT +D + +A LP +   +P       +   +    +  +A   
Sbjct: 352 RPPPTGG-----PAGQLTPEDLEAIAVLPSIHSVMPVIGDPITVRRGNAERQLYVFAASE 406

Query: 124 EYQAMNKLRLLPGGRWFNPVDETQQRKVVVLGYQLAVQLFNQQEGDWFSGGELEQDPVGQ 183
           E  A++  ++  G R++   ++     +VVLG++     F               +P+GQ
Sbjct: 407 EMPAVHHWQVAQG-RYYTAAEDRNLAPLVVLGHKAREHFFAGMA-----------NPLGQ 454

Query: 184 IAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQ-RFHPNQAISGINLEPRVGS 242
              IG   F VIGV+A+   +       D   F P+   + R +  Q      +     S
Sbjct: 455 QLLIGNSPFEVIGVMAERGAD-SGAQDYDNMVFIPYQAGRARVYQAQTQPDYVVVQAASS 513

Query: 243 DRQALAATVQQVLKRKYAASLQDQQI----VMVQDHFLSQKSMQQFLLRLQSFLGIIGFI 298
            +   A      L        +D  I      +Q    +++SM   L       G+I  +
Sbjct: 514 AQVHAAEAAMHALLLARHGGREDFSIGNAAARLQAEVATRRSMSMML-------GLIAAV 566

Query: 299 TLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAGL--G 356
           +L V  +G+ NVM  TV+  TR+IG+RMA GA    I   +L ++ +   MGG  GL  G
Sbjct: 567 SLLVGGIGVMNVMLMTVRERTREIGIRMAAGARQRDILRQFLTEATMVTVMGGAVGLAAG 626

Query: 357 VTFAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKV 416
           +      + A +P                 S+S +          G+V  ++PA  AA++
Sbjct: 627 LLVGAALIAAGVP--------------TVFSVSAMAGAFGCAVATGLVFGYMPARTAARL 672

Query: 417 TPLQALQSE 425
            P+ AL  E
Sbjct: 673 DPVVALAGE 681