Pairwise Alignments

Query, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 73/269 (27%)

Query: 181 VGQIAKIGAHEFTVIGVLAK------NSGNIEQGS------PIDYSGFTPFSTWQRFHPN 228
           +G+   +G   F VIGVL +      ++ N+E  S      P DY  +            
Sbjct: 178 LGKSVYMGTQHFVVIGVLERLQTAWVDNKNLEFSSVLSVNYPADYKRY------------ 225

Query: 229 QAISGINLEPRVGSDRQALAATVQQVLKRKYAA-------SLQDQQIVMVQDHFLSQKSM 281
                  L     SD   L   + ++L ++Y +       ++ +++I   +DH L     
Sbjct: 226 -------LVRAKSSDMARLKEVIPELLHKEYPSRVVEGFTTMGERRIEAYRDHEL----- 273

Query: 282 QQFLLRLQSFLGIIGFITLAVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLA 341
                 + + L ++  + L + SLG+T ++   ++R T+ IG R A+GA    I  ++L 
Sbjct: 274 ------MATVLTMMVVLLLLITSLGVTGMVMFNIQRRTKQIGTRRALGAKKRDIISYFLV 327

Query: 342 QSLITMGMGGIAGLGVTFAMVRLLAAIPLQGNPIYDHLGQPVPEL-SLSVIVIVIVTITV 400
           ++ +   +GG   +GV  A+                 LGQ +  L SL ++ IV   +TV
Sbjct: 328 ENYLLCLLGG--SIGVLLAI----------------QLGQQLMSLYSLPMLEIVYPLLTV 369

Query: 401 MGI-----VAAWLPANHAAKVTPLQALQS 424
            G+     +A +LPA  AAK++P  A +S
Sbjct: 370 AGLFAVTTLAVYLPARKAAKISPATATRS 398