Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., Pyoverdine efflux carrier and ATP binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (289), Expect = 3e-30
 Identities = 115/413 (27%), Positives = 193/413 (46%), Gaps = 41/413 (9%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           +Q +W+ +  +R ++ L +  I  GV SVV+++A+GEG  R             QM A G
Sbjct: 269 VQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVM---------AQMGAFG 319

Query: 65  QTSEVWQGM-PARRPIQ--LTESLMREVAQRPEIQRYSIVYENREVSITQQRGTAIGSMV 121
                  G  P+ R  +  ++E  +  +A  PE+QR  I+  N   +  +       S V
Sbjct: 320 SNIIYLNGSAPSPRAAKGIISEYDLAALAALPEVQR--IMPVNGADASVRFGNLDHTSYV 377

Query: 122 SGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAATSQLKIGDE----FKIRG 177
            G D  +  +    +  GS  FS  D+ +   VA++G  V       + D       I  
Sbjct: 378 GGNDTNFPIIFNWPVAQGSY-FSEADERSAAAVAVIGYRVRQKLFKDVADPVGRYILIEN 436

Query: 178 IAFRVIGIMDDESSRFSFGD-NQKVFIP-SSTFKDIWDTQPNMMLVLPAQGVSSWALREQ 235
           + F+V+G++ ++ +     D + +V +P S+    ++ ++    +V+ A+        EQ
Sbjct: 437 MPFQVVGVLAEKGASSGDSDADDRVAVPYSAASVRLFGSRHPEYVVIAAKDAGKVKEAEQ 496

Query: 236 LRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRG---IQAFLAASGMMTMAVGILGV 292
                  RLH   +D E        +  A+I A  R    +   L A   +++ VG +GV
Sbjct: 497 AVSRTLLRLHDGKKDFELT------NNAAMIQAEARTQGTLSLMLGAIAAISLLVGGIGV 550

Query: 293 ANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGAL--VGLLLAYFGVLLL 350
            N+M + V ERTREIG+R+A GA  + I +QFL E ++L V+G L  +GL L   G LLL
Sbjct: 551 MNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIGLALLVGGALLL 610

Query: 351 NHLGLP-TWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALSS 402
             + +   WL         V+ +     +  +   + PAR+AA+L+PV AL+S
Sbjct: 611 GKIAVAFEWL--------AVFGAFGCALVTGVVFGFMPARKAARLDPVAALTS 655