Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., macrolide transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  125 bits (313), Expect = 5e-33
 Identities = 100/413 (24%), Positives = 203/413 (49%), Gaps = 46/413 (11%)

Query: 8   SWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASGQTS 67
           +W  L++HR++++L +  I  G+ SVV ++A+GEG  +       ++L++ Q + S  T 
Sbjct: 266 AWVALVSHRMRTLLTMLGIIIGITSVVSIVAIGEGVKQ-------YVLKDIQAIGSN-TI 317

Query: 68  EVWQGMP--ARRPIQLTESLMREV----------AQRPEIQRYSIV-YENREVSITQQRG 114
           E+  G      R   +   ++ +V          +  P + R  ++ YEN +V+ T    
Sbjct: 318 EIMPGSDWGDSRSTAIETLVLSDVTALGDQYYIDSATPNLGRNLLLRYENIDVNAT---- 373

Query: 115 TAIGSMVSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVA----ATSQLKIG 170
                 V+GV   YF + G+K+  G   FS  D     +V ++  + +     +    +G
Sbjct: 374 ------VNGVSASYFQVRGIKIGSGVA-FSKDDARRQSQVVVIDHNTSHRLFGSHTDPLG 426

Query: 171 DEFKIRGIAFRVIGIMDDESSRFSFGDNQKVFIPSSTFKD--IWDTQPNMMLVLPAQGVS 228
               +  +   VIG+ +D  S F+   N  +++P  T     +     + + V    G  
Sbjct: 427 KVILVDNLPCTVIGVTEDRKSVFNTSKNLNIWMPYETAAGRLLGQRFLDSITVRIKDGQP 486

Query: 229 SWALREQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVG 288
           S  + + +     QR        +  F  +  S +  +    + +   L+   ++++ VG
Sbjct: 487 SKLVEDNVVKLLTQR-----HGIKDFFTYNLDSVMQTVQKTSQSLALLLSLIAIISLVVG 541

Query: 289 ILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVL 348
            +GV N+M ++VTERTREIG+R+A+GA    I+QQFL+E +++ ++G  +G+ L+ FG+ 
Sbjct: 542 GIGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLMGGTIGIALS-FGIG 600

Query: 349 LLNHLGLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALS 401
            +  + +  W  + V +  ++  +++ ++++ +   + PAR AA+L+P+ AL+
Sbjct: 601 YVFSIFVKEW--QMVFSVGSIVTAVVCSTLIGIVFGFVPARNAARLDPINALA 651