Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  117 bits (294), Expect = 8e-31
 Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 35/410 (8%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           ++ +W+ +  +R ++ L +  I  GV SVV+++A+GEG  R             QM + G
Sbjct: 270 IRAAWRVMWINRFRTALTLLGIVIGVASVVVMLAVGEGSKRQVM---------AQMSSFG 320

Query: 65  QTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYSIVYE-NREVSITQQRGTAIGSMVSG 123
                  G             + EVA   E+    ++   N   +  +       S V G
Sbjct: 321 SNIIYLNGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGG 380

Query: 124 VDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVA----ATSQLKIGDEFKIRGIA 179
            D  + ++    +  GS  FS  D+ N   VA++G  V           +G    I  + 
Sbjct: 381 NDTHFPAIFNWPVVEGSY-FSEADEQNAAAVAVIGYKVRQKLFGEQSDPVGQYILIENVP 439

Query: 180 FRVIGIMDDESSRFSFGDNQ-KVFIP-SSTFKDIWDTQPNMMLVLPAQGVSSWALREQLR 237
           F+V+G++ ++ +     D+  ++ IP SS    ++ TQ    + +  +  ++    EQ  
Sbjct: 440 FQVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGTQDPEYITIATRDANNVKQAEQSI 499

Query: 238 HTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRG---IQAFLAASGMMTMAVGILGVAN 294
               Q+LH   +D E        +  A+I A  R    +   L +   +++ VG +GV N
Sbjct: 500 RNLLQQLHHGKQDYELT------NNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMN 553

Query: 295 MMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLA--YFGVLLLNH 352
           +M + V ERTREIG+R+A GA    I +QFL E ++L V+G L G++LA      LLL+ 
Sbjct: 554 IMLMTVRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGIVLALGMGAALLLSK 613

Query: 353 LGLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALSS 402
           + +   L  P +     +   L+T ++     + PAR+AA+L+PV AL+S
Sbjct: 614 VAVAFTL--PAVAG--AFACALITGVI---FGFMPARKAARLDPVAALTS 656