Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., ABC transporter permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (322), Expect = 3e-34
 Identities = 114/417 (27%), Positives = 208/417 (49%), Gaps = 40/417 (9%)

Query: 7   QSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFL--LQETQMVASG 64
           Q+   +L H+L++ L +  + +GV +V+ ++++GEG   A+ E+ + +  +    +V + 
Sbjct: 15  QALGEMLHHKLRTALTLLGMIFGVGAVIAMLSVGEG---AEREALKMIESMGIKNLVVNA 71

Query: 65  QTSEVWQGMPARRPIQLTESLMREVAQR----PEIQRYSIVYENREVSITQQRGTAIGSM 120
           + SE  + +   R   +  SL R++       P I+ YS   + +   +   +G +  ++
Sbjct: 72  RPSE-GEALKTVREHSIGLSL-RDIESAMETLPFIEAYSAGKQVKVFGLFSVQGRS-DAL 128

Query: 121 VSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAATSQLK---IGDEFKIRG 177
           V GV   YF L+ LKL  G R     D+ + R++A+LG   A +   +   +G   KI  
Sbjct: 129 VQGVTPSYFDLSALKLAEG-RLLGDEDEQHFRQLAVLGPEAARSLFPRGDAVGQRIKINH 187

Query: 178 IAFRVIGIMDDESSRFSF-------GDNQKVFIPSST------FKDIWDTQPNMMLVLPA 224
             F V+G++D+     S        G+  +VFIP +T      FK + D    +   L  
Sbjct: 188 QWFTVVGVLDEGEKGKSAIEGVKVGGERNQVFIPLATALKKMQFKPLEDELDTIKFALK- 246

Query: 225 QGVSSWALREQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMT 284
           +G+      + + H  ++R H + +D + V   D  +       I   + A +A    ++
Sbjct: 247 EGIDPSLAAKSVEHLLSRR-HGNEQDYDIVVPADLLAQHQRTQQIFNIVMACVAG---IS 302

Query: 285 MAVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAY 344
           + VG +G+ N+M   + ERT EIG+  A+GAT + I +QFL+E +++   G L+G+    
Sbjct: 303 LLVGGIGIMNIMLATILERTSEIGLLRALGATQKDIARQFLIESMVISATGGLIGI---- 358

Query: 345 FGVLLLNHLGLPTWLGEPVITST-TVWLSMLVTSILALAAAYFPARRAAQLEPVIAL 400
            GV LL  L +    G PV  S   + LS+LV   + +    +PA++AA+L+P++AL
Sbjct: 359 -GVGLLLALVISAAAGWPVAWSVFAILLSLLVCMAVGIGFGLYPAKKAARLDPIVAL 414